Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51966 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G43978 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 10253724 ~ 10253938 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51888 | lncRNA | downstream | 10842 | 10241941 ~ 10242882 (-) | True | G43910 |
| TU51773 | lncRNA | downstream | 92222 | 10158929 ~ 10161502 (-) | True | opn4a |
| TU51754 | lncRNA | downstream | 126093 | 10127414 ~ 10127631 (-) | True | G43790 |
| TU51751 | lncRNA | downstream | 137008 | 10115935 ~ 10116716 (-) | True | G43787 |
| TU51707 | lncRNA | downstream | 221649 | 10030568 ~ 10032075 (-) | True | G43749 |
| TU51974 | lncRNA | upstream | 11418 | 10265356 ~ 10265588 (-) | True | G43981 |
| TU51975 | lncRNA | upstream | 37129 | 10291067 ~ 10305082 (-) | True | G43982 |
| TU51991 | lncRNA | upstream | 61787 | 10315725 ~ 10316448 (-) | True | G43987 |
| TU52133 | lncRNA | upstream | 399776 | 10653714 ~ 10655844 (-) | True | G44103 |
| TU52138 | lncRNA | upstream | 419408 | 10673346 ~ 10723668 (-) | True | G44105 |
| XM_026933185.2 | mRNA | downstream | 637 | 10244156 ~ 10253087 (-) | True | synpo2la |
| XM_026941996.2 | mRNA | downstream | 12941 | 10234757 ~ 10240783 (-) | True | myoz1a |
| XM_034302778.1 | mRNA | downstream | 31522 | 10165718 ~ 10222202 (-) | False | usp54a |
| XM_026941011.2 | mRNA | upstream | 1687 | 10255625 ~ 10318195 (-) | False | camk2g2 |
| XM_026940966.2 | mRNA | upstream | 1687 | 10255625 ~ 10318195 (-) | False | camk2g2 |
| XM_026940948.2 | mRNA | upstream | 1687 | 10255625 ~ 10318195 (-) | False | camk2g2 |
| XM_026940931.2 | mRNA | upstream | 1687 | 10255625 ~ 10318195 (-) | False | camk2g2 |
| XM_026940922.2 | mRNA | upstream | 1687 | 10255625 ~ 10318195 (-) | False | camk2g2 |
| TU51003 | other | downstream | 1024840 | 9224881 ~ 9228884 (-) | True | sf3b5 |
| TU50809 | other | downstream | 1399930 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 1399930 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 1469926 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 1783295 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnag-gcc_1 | other | upstream | 1454676 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 1890957 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 2270698 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 2277505 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 2377875 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
