Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU55218 |
| length | 204 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G46711 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 15012247 ~ 15012450 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55183 | lncRNA | downstream | 74938 | 14937096 ~ 14937309 (-) | True | G46680 |
| TU55026 | lncRNA | downstream | 386277 | 14617653 ~ 14625970 (-) | True | G46576 |
| TU55042 | lncRNA | downstream | 397483 | 14614516 ~ 14614764 (-) | True | G46591 |
| TU55041 | lncRNA | downstream | 398429 | 14613541 ~ 14613818 (-) | True | G46590 |
| TU54707 | lncRNA | downstream | 720614 | 14289556 ~ 14291633 (-) | True | G46304 |
| TU55261 | lncRNA | upstream | 48406 | 15060856 ~ 15061173 (-) | True | G46750 |
| TU55267 | lncRNA | upstream | 52068 | 15064518 ~ 15065307 (-) | False | G46754 |
| TU55265 | lncRNA | upstream | 52584 | 15065034 ~ 15065999 (-) | True | G46754 |
| TU55268 | lncRNA | upstream | 52584 | 15065034 ~ 15065307 (-) | False | G46754 |
| TU55417 | lncRNA | upstream | 94467 | 15106917 ~ 15153696 (-) | True | G46869 |
| XM_026944180.2 | mRNA | downstream | 2657 | 14997517 ~ 15009590 (-) | False | nt5c2a |
| XM_026944160.2 | mRNA | downstream | 2657 | 14997517 ~ 15009590 (-) | True | nt5c2a |
| XM_026944170.2 | mRNA | downstream | 2658 | 14997517 ~ 15009589 (-) | False | nt5c2a |
| XM_034303163.1 | mRNA | downstream | 2659 | 14997517 ~ 15009588 (-) | False | nt5c2a |
| XM_034302813.1 | mRNA | downstream | 45446 | 14962949 ~ 14966801 (-) | False | LOC113542020 |
| XM_026945723.2 | mRNA | upstream | 6033 | 15018483 ~ 15024828 (-) | True | pcgf6 |
| XM_026943448.2 | mRNA | upstream | 66573 | 15079023 ~ 15084329 (-) | True | LOC113544576 |
| XM_026942915.2 | mRNA | upstream | 400463 | 15412913 ~ 15416294 (-) | True | c3h10orf53 |
| XM_026942598.2 | mRNA | upstream | 406292 | 15418742 ~ 15428240 (-) | False | chata |
| XM_026942590.2 | mRNA | upstream | 406292 | 15418742 ~ 15428240 (-) | True | chata |
| TU55100 | other | downstream | 227513 | 14779865 ~ 14784734 (-) | False | sdhaf4 |
| XR_004577668.1 | other | downstream | 820004 | 14181891 ~ 14192243 (-) | True | ccdc85a |
| XR_004577863.1 | other | downstream | 1981051 | 13005486 ~ 13031196 (-) | False | slka |
| trnal-cag | other | downstream | 2277965 | 12734200 ~ 12734282 (-) | True | trnal-cag |
| trnae-cuc_9 | other | downstream | 2343356 | 12668820 ~ 12668891 (-) | True | trnae-cuc_9 |
| TU55523 | other | upstream | 401491 | 15413941 ~ 15416483 (-) | False | c3h10orf53 |
| XR_004577773.1 | other | upstream | 1966681 | 16979131 ~ 16982729 (-) | False | morn4 |
| XR_004577771.1 | other | upstream | 1966681 | 16979131 ~ 16982729 (-) | False | morn4 |
| XR_004577772.1 | other | upstream | 1966681 | 16979131 ~ 16982729 (-) | False | morn4 |
| TU56907 | other | upstream | 2458737 | 17471187 ~ 17476061 (-) | True | cisd1 |
