Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU55689 |
| length | 660 |
| RNA type | TUCP |
| GC content | 0.44 |
| exon number | 4 |
| gene id | cxcl18a.1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 16070714 ~ 16075650 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55664 | lncRNA | upstream | 35420 | 16033304 ~ 16035339 (+) | True | G47084 |
| TU55651 | lncRNA | upstream | 174680 | 15893581 ~ 15896079 (+) | True | G47071 |
| TU55615 | lncRNA | upstream | 355235 | 15711137 ~ 15715524 (+) | True | G47043 |
| TU55393 | lncRNA | upstream | 596889 | 15473201 ~ 15473870 (+) | True | G46849 |
| TU55373 | lncRNA | upstream | 651117 | 15419029 ~ 15419642 (+) | True | G46833 |
| TU55821 | lncRNA | downstream | 31916 | 16103836 ~ 16104050 (+) | True | G47224 |
| TU55827 | lncRNA | downstream | 52746 | 16124666 ~ 16134002 (+) | True | cxcl12a |
| TU55863 | lncRNA | downstream | 120775 | 16192695 ~ 16203524 (+) | True | G47265 |
| TU55862 | lncRNA | downstream | 121496 | 16193416 ~ 16203524 (+) | False | G47265 |
| TU55957 | lncRNA | downstream | 234548 | 16306468 ~ 16308843 (+) | False | arhgap22 |
| XM_026940448.2 | mRNA | upstream | 13501 | 16056384 ~ 16057258 (+) | True | si:ch73-6k14.2 |
| XM_034302962.1 | mRNA | upstream | 79705 | 15987439 ~ 15991054 (+) | True | ppifa |
| XM_034302963.1 | mRNA | upstream | 79705 | 15987645 ~ 15991054 (+) | False | ppifa |
| XM_026935843.2 | mRNA | upstream | 84406 | 15957929 ~ 15986353 (+) | False | zmiz1a |
| XM_026940430.2 | mRNA | downstream | 815 | 16072735 ~ 16075650 (+) | False | cxcl18a.1 |
| XM_026934386.2 | mRNA | downstream | 52707 | 16124627 ~ 16133719 (+) | False | cxcl12a |
| XM_026943279.2 | mRNA | downstream | 91178 | 16163098 ~ 16181155 (+) | True | ercc6 |
| XM_026943611.2 | mRNA | downstream | 111089 | 16183009 ~ 16188933 (+) | True | drgx |
| XM_026932409.2 | mRNA | downstream | 138640 | 16210560 ~ 16219838 (+) | True | vstm4a |
| TU55629 | other | upstream | 273555 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_004577898.1 | other | upstream | 1703313 | 14361367 ~ 14367446 (+) | False | cgas |
| XR_003404567.2 | other | upstream | 1787591 | 14213402 ~ 14283168 (+) | False | slc24a3 |
| TU54033 | other | upstream | 2569713 | 13498092 ~ 13501046 (+) | False | pcbd1 |
| TU53738 | other | upstream | 3037511 | 13032279 ~ 13033248 (+) | False | si:ch211-223p8.8 |
| TU55884 | other | downstream | 162615 | 16234535 ~ 16236648 (+) | False | lrrc18a |
| XR_003403773.2 | other | downstream | 3269430 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| XR_004577568.1 | other | downstream | 3269430 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_004577569.1 | other | downstream | 3269430 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403774.2 | other | downstream | 3269430 | 19341350 ~ 19356098 (+) | False | sfxn5a |
