Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU55884 |
| length | 944 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 2 |
| gene id | lrrc18a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 16234514 ~ 16237542 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55863 | lncRNA | upstream | 31011 | 16192695 ~ 16203524 (+) | True | G47265 |
| TU55862 | lncRNA | upstream | 31011 | 16193416 ~ 16203524 (+) | False | G47265 |
| TU55827 | lncRNA | upstream | 100533 | 16124666 ~ 16134002 (+) | True | cxcl12a |
| TU55821 | lncRNA | upstream | 130485 | 16103836 ~ 16104050 (+) | True | G47224 |
| TU55664 | lncRNA | upstream | 199196 | 16033304 ~ 16035339 (+) | True | G47084 |
| TU55957 | lncRNA | downstream | 69820 | 16306468 ~ 16308843 (+) | False | arhgap22 |
| TU56057 | lncRNA | downstream | 158357 | 16395005 ~ 16397038 (+) | True | G47406 |
| XR_004577907.1 | lncRNA | downstream | 205414 | 16442062 ~ 16451765 (+) | True | LOC117596920 |
| TU56095 | lncRNA | downstream | 222597 | 16459245 ~ 16459911 (+) | True | G47431 |
| TU56133 | lncRNA | downstream | 229324 | 16465972 ~ 16467346 (+) | False | marveld1 |
| XM_026932409.2 | mRNA | upstream | 14697 | 16210560 ~ 16219838 (+) | True | vstm4a |
| XM_026943611.2 | mRNA | upstream | 45602 | 16183009 ~ 16188933 (+) | True | drgx |
| XM_026943279.2 | mRNA | upstream | 53380 | 16163098 ~ 16181155 (+) | True | ercc6 |
| XM_026934386.2 | mRNA | upstream | 100816 | 16124627 ~ 16133719 (+) | False | cxcl12a |
| XM_026940430.2 | mRNA | upstream | 158885 | 16072735 ~ 16075650 (+) | False | cxcl18a.1 |
| XM_026941903.2 | mRNA | downstream | 34649 | 16271297 ~ 16279590 (+) | True | si:ch211-223a10.1 |
| XM_034302718.1 | mRNA | downstream | 48474 | 16285122 ~ 16308898 (+) | False | arhgap22 |
| XM_026945426.2 | mRNA | downstream | 50191 | 16286839 ~ 16308247 (+) | False | arhgap22 |
| XM_026945434.2 | mRNA | downstream | 59813 | 16296461 ~ 16308898 (+) | True | arhgap22 |
| XM_034301942.1 | mRNA | downstream | 86905 | 16323553 ~ 16358384 (+) | True | ptpn20 |
| XR_003404341.2 | other | upstream | 161468 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
| TU55689 | other | upstream | 162615 | 16070759 ~ 16071920 (+) | False | cxcl18a.1 |
| TU55629 | other | upstream | 437331 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_004577898.1 | other | upstream | 1867089 | 14361367 ~ 14367446 (+) | False | cgas |
| XR_003404567.2 | other | upstream | 1951367 | 14213402 ~ 14283168 (+) | False | slc24a3 |
| XR_003403773.2 | other | downstream | 3104702 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| XR_004577568.1 | other | downstream | 3104702 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_004577569.1 | other | downstream | 3104702 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403774.2 | other | downstream | 3104702 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403775.2 | other | downstream | 3104702 | 19341350 ~ 19356098 (+) | False | sfxn5a |
