Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU57821 |
| length | 692 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 1 |
| gene id | zgc:110319 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 18902438 ~ 18912195 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU57584 | lncRNA | upstream | 200191 | 18708032 ~ 18711295 (+) | False | G48690 |
| TU57585 | lncRNA | upstream | 201115 | 18708032 ~ 18710371 (+) | True | G48690 |
| TU57373 | lncRNA | upstream | 209580 | 18673311 ~ 18701906 (+) | False | G48482 |
| TU57371 | lncRNA | upstream | 209580 | 18677230 ~ 18701906 (+) | True | G48482 |
| TU57372 | lncRNA | upstream | 209580 | 18700856 ~ 18701906 (+) | False | G48482 |
| TU57833 | lncRNA | downstream | 55229 | 18967406 ~ 18967777 (+) | True | G48908 |
| TU57836 | lncRNA | downstream | 58621 | 18970798 ~ 18974710 (+) | True | G48911 |
| XR_004577820.1 | lncRNA | downstream | 102014 | 19014191 ~ 19015574 (+) | True | LOC117596836 |
| TU57789 | lncRNA | downstream | 114830 | 19027007 ~ 19036636 (+) | False | selenou1a |
| TU57791 | lncRNA | downstream | 114830 | 19027007 ~ 19036636 (+) | False | selenou1a |
| XM_026937057.2 | mRNA | upstream | 16088 | 18891221 ~ 18895398 (+) | True | eif4e1c |
| XM_026935928.2 | mRNA | upstream | 28055 | 18852702 ~ 18883431 (+) | False | tet1 |
| XM_026935913.2 | mRNA | upstream | 28055 | 18854841 ~ 18883431 (+) | True | tet1 |
| XM_034302756.1 | mRNA | upstream | 28055 | 18854841 ~ 18883431 (+) | False | tet1 |
| XM_026934506.2 | mRNA | upstream | 211807 | 18695720 ~ 18699679 (+) | True | LOC113538988 |
| XM_026936555.2 | mRNA | downstream | 1405 | 18913582 ~ 18933062 (+) | False | ccar1 |
| XM_026936546.2 | mRNA | downstream | 1508 | 18913685 ~ 18933062 (+) | True | ccar1 |
| XM_026943192.2 | mRNA | downstream | 27588 | 18939765 ~ 18956226 (+) | True | stox1 |
| XM_026938324.2 | mRNA | downstream | 46207 | 18958384 ~ 18963875 (+) | True | si:ch211-198a12.6 |
| XM_026938333.2 | mRNA | downstream | 46207 | 18958384 ~ 18963875 (+) | False | si:ch211-198a12.6 |
| TU55884 | other | upstream | 2674838 | 16234535 ~ 16236648 (+) | False | lrrc18a |
| XR_003404341.2 | other | upstream | 2838419 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
| TU55689 | other | upstream | 2839566 | 16070759 ~ 16071920 (+) | False | cxcl18a.1 |
| TU55629 | other | upstream | 3114282 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_004577898.1 | other | upstream | 4544040 | 14361367 ~ 14367446 (+) | False | cgas |
| XR_003403773.2 | other | downstream | 429173 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| XR_004577568.1 | other | downstream | 429173 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_004577569.1 | other | downstream | 429173 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403774.2 | other | downstream | 429173 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403775.2 | other | downstream | 429173 | 19341350 ~ 19356098 (+) | False | sfxn5a |
