Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU57908 |
| length | 303 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G48970 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 18957157 ~ 18957459 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU57886 | lncRNA | downstream | 27655 | 18928182 ~ 18929502 (-) | True | G48954 |
| TU57878 | lncRNA | downstream | 66345 | 18890563 ~ 18890812 (-) | True | G48947 |
| TU57868 | lncRNA | downstream | 103444 | 18853513 ~ 18853713 (-) | True | G48940 |
| TU57866 | lncRNA | downstream | 112522 | 18843753 ~ 18844635 (-) | True | G48938 |
| TU57364 | lncRNA | downstream | 783975 | 18167020 ~ 18173182 (-) | False | G48476 |
| TU57913 | lncRNA | upstream | 12132 | 18969591 ~ 18969796 (-) | True | G48975 |
| TU58001 | lncRNA | upstream | 95068 | 19052527 ~ 19052751 (-) | True | G49053 |
| TU58066 | lncRNA | upstream | 232868 | 19190327 ~ 19190615 (-) | True | G49108 |
| TU58155 | lncRNA | upstream | 294134 | 19251593 ~ 19251863 (-) | True | G49184 |
| TU58193 | lncRNA | upstream | 443205 | 19400664 ~ 19400863 (-) | True | G49215 |
| XM_026937044.2 | mRNA | downstream | 53637 | 18898163 ~ 18903520 (-) | True | si:dkey-228d14.5 |
| XM_034302735.1 | mRNA | downstream | 54154 | 18898163 ~ 18903003 (-) | False | si:dkey-228d14.5 |
| XM_026932472.2 | mRNA | downstream | 105050 | 18845152 ~ 18852107 (-) | True | slc25a16 |
| XM_026945920.2 | mRNA | downstream | 119360 | 18831551 ~ 18837797 (-) | True | alox5a |
| XM_026940099.2 | mRNA | downstream | 128835 | 18810075 ~ 18828322 (-) | False | washc2c |
| XM_026932754.2 | mRNA | upstream | 54522 | 19011981 ~ 19018909 (-) | True | mat1a |
| XM_026934553.2 | mRNA | upstream | 79533 | 19036992 ~ 19044321 (-) | True | sfxn3 |
| XM_034303009.1 | mRNA | upstream | 107574 | 19065033 ~ 19114569 (-) | False | lzts2a |
| XM_026942868.2 | mRNA | upstream | 107574 | 19065033 ~ 19082306 (-) | True | lzts2a |
| XM_034302895.1 | mRNA | upstream | 181036 | 19138495 ~ 19171153 (-) | True | sema4ga |
| TU57664 | other | downstream | 343756 | 18330368 ~ 18613401 (-) | True | lrmda |
| TU56951 | other | downstream | 1295773 | 17657581 ~ 17661384 (-) | False | col13a1 |
| XR_004577786.1 | other | downstream | 1382735 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
| XR_004577787.1 | other | downstream | 1382735 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
| TU56907 | other | downstream | 1481096 | 17471187 ~ 17476061 (-) | True | cisd1 |
| TU58169 | other | upstream | 359028 | 19316487 ~ 19319733 (-) | True | G49195 |
| XR_004577815.1 | other | upstream | 678379 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58944 | other | upstream | 1400475 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | upstream | 1400529 | 20357988 ~ 20369097 (-) | False | gng2 |
| TU58946 | other | upstream | 1400529 | 20357988 ~ 20369429 (-) | False | gng2 |
