Item | Value |
---|---|
RNA id | TU58001 |
length | 225 |
lncRNA type | inter_gene |
GC content | 0.59 |
exon number | 1 |
gene id | G49053 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047597.1 |
NCBI id | CM018543.1 |
chromosome length | 33776708 |
location | 19052527 ~ 19052751 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU57913 | lncRNA | downstream | 82731 | 18969591 ~ 18969796 (-) | True | G48975 |
TU57908 | lncRNA | downstream | 95068 | 18957157 ~ 18957459 (-) | True | G48970 |
TU57886 | lncRNA | downstream | 123025 | 18928182 ~ 18929502 (-) | True | G48954 |
TU57878 | lncRNA | downstream | 161715 | 18890563 ~ 18890812 (-) | True | G48947 |
TU57868 | lncRNA | downstream | 198814 | 18853513 ~ 18853713 (-) | True | G48940 |
TU58066 | lncRNA | upstream | 137576 | 19190327 ~ 19190615 (-) | True | G49108 |
TU58155 | lncRNA | upstream | 198842 | 19251593 ~ 19251863 (-) | True | G49184 |
TU58193 | lncRNA | upstream | 347913 | 19400664 ~ 19400863 (-) | True | G49215 |
TU58214 | lncRNA | upstream | 374995 | 19427746 ~ 19428725 (-) | True | G49232 |
TU58488 | lncRNA | upstream | 635841 | 19688592 ~ 19688877 (-) | True | G49481 |
XM_026934553.2 | mRNA | downstream | 8206 | 19036992 ~ 19044321 (-) | True | sfxn3 |
XM_026932754.2 | mRNA | downstream | 33618 | 19011981 ~ 19018909 (-) | True | mat1a |
XM_026937044.2 | mRNA | downstream | 149007 | 18898163 ~ 18903520 (-) | True | si:dkey-228d14.5 |
XM_034302735.1 | mRNA | downstream | 149524 | 18898163 ~ 18903003 (-) | False | si:dkey-228d14.5 |
XM_026932472.2 | mRNA | downstream | 200420 | 18845152 ~ 18852107 (-) | True | slc25a16 |
XM_034303009.1 | mRNA | upstream | 12282 | 19065033 ~ 19114569 (-) | False | lzts2a |
XM_026942868.2 | mRNA | upstream | 12282 | 19065033 ~ 19082306 (-) | True | lzts2a |
XM_034302895.1 | mRNA | upstream | 85744 | 19138495 ~ 19171153 (-) | True | sema4ga |
XM_026941939.2 | mRNA | upstream | 120489 | 19173240 ~ 19185983 (-) | True | slf2 |
XM_034303029.1 | mRNA | upstream | 120489 | 19173240 ~ 19185975 (-) | False | slf2 |
TU57664 | other | downstream | 439126 | 18330368 ~ 18613401 (-) | True | lrmda |
TU56951 | other | downstream | 1391143 | 17657581 ~ 17661384 (-) | False | col13a1 |
XR_004577786.1 | other | downstream | 1478105 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
XR_004577787.1 | other | downstream | 1478105 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
TU56907 | other | downstream | 1576466 | 17471187 ~ 17476061 (-) | True | cisd1 |
TU58169 | other | upstream | 263736 | 19316487 ~ 19319733 (-) | True | G49195 |
XR_004577815.1 | other | upstream | 583087 | 19635838 ~ 19667661 (-) | False | atrn |
TU58944 | other | upstream | 1305183 | 20357934 ~ 20369097 (-) | False | gng2 |
TU58943 | other | upstream | 1305237 | 20357988 ~ 20369097 (-) | False | gng2 |
TU58946 | other | upstream | 1305237 | 20357988 ~ 20369429 (-) | False | gng2 |