Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU58066 |
| length | 265 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G49108 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 19190327 ~ 19190615 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58001 | lncRNA | downstream | 137576 | 19052527 ~ 19052751 (-) | True | G49053 |
| TU57913 | lncRNA | downstream | 220531 | 18969591 ~ 18969796 (-) | True | G48975 |
| TU57908 | lncRNA | downstream | 232868 | 18957157 ~ 18957459 (-) | True | G48970 |
| TU57886 | lncRNA | downstream | 260825 | 18928182 ~ 18929502 (-) | True | G48954 |
| TU57878 | lncRNA | downstream | 299515 | 18890563 ~ 18890812 (-) | True | G48947 |
| TU58155 | lncRNA | upstream | 60978 | 19251593 ~ 19251863 (-) | True | G49184 |
| TU58193 | lncRNA | upstream | 210049 | 19400664 ~ 19400863 (-) | True | G49215 |
| TU58214 | lncRNA | upstream | 237131 | 19427746 ~ 19428725 (-) | True | G49232 |
| TU58488 | lncRNA | upstream | 497977 | 19688592 ~ 19688877 (-) | True | G49481 |
| TU58495 | lncRNA | upstream | 523550 | 19714165 ~ 19715420 (-) | True | G49484 |
| XM_026941939.2 | mRNA | downstream | 4344 | 19173240 ~ 19185983 (-) | True | slf2 |
| XM_034303029.1 | mRNA | downstream | 4352 | 19173240 ~ 19185975 (-) | False | slf2 |
| XM_034302895.1 | mRNA | downstream | 19174 | 19138495 ~ 19171153 (-) | True | sema4ga |
| XM_034303009.1 | mRNA | downstream | 75758 | 19065033 ~ 19114569 (-) | False | lzts2a |
| XM_026942868.2 | mRNA | downstream | 108021 | 19065033 ~ 19082306 (-) | True | lzts2a |
| XM_026940534.2 | mRNA | upstream | 12497 | 19203112 ~ 19214161 (-) | False | wdr32 |
| XM_026940524.2 | mRNA | upstream | 12497 | 19203112 ~ 19214160 (-) | True | wdr32 |
| XM_026940547.2 | mRNA | upstream | 19664 | 19210279 ~ 19212029 (-) | True | pomk |
| XM_026943318.2 | mRNA | upstream | 26999 | 19217614 ~ 19219603 (-) | True | zgc:123321 |
| XM_034302920.1 | mRNA | upstream | 31811 | 19222426 ~ 19235665 (-) | True | alms1 |
| TU57664 | other | downstream | 576926 | 18330368 ~ 18613401 (-) | True | lrmda |
| TU56951 | other | downstream | 1528943 | 17657581 ~ 17661384 (-) | False | col13a1 |
| XR_004577786.1 | other | downstream | 1615905 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
| XR_004577787.1 | other | downstream | 1615905 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
| TU56907 | other | downstream | 1714266 | 17471187 ~ 17476061 (-) | True | cisd1 |
| TU58169 | other | upstream | 125872 | 19316487 ~ 19319733 (-) | True | G49195 |
| XR_004577815.1 | other | upstream | 445223 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58944 | other | upstream | 1167319 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | upstream | 1167373 | 20357988 ~ 20369097 (-) | False | gng2 |
| TU58946 | other | upstream | 1167373 | 20357988 ~ 20369429 (-) | False | gng2 |
