Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU58135 |
| length | 286 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 4 |
| gene id | sfxn5a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 19341350 ~ 19356098 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58126 | lncRNA | upstream | 46062 | 19295082 ~ 19295293 (+) | True | G49157 |
| TU58109 | lncRNA | upstream | 73766 | 19266545 ~ 19267589 (+) | True | G49146 |
| TU58106 | lncRNA | upstream | 84195 | 19256096 ~ 19257160 (+) | False | LOC113539574 |
| TU58081 | lncRNA | upstream | 124475 | 19214792 ~ 19216880 (+) | False | grxcr1b |
| TU58057 | lncRNA | upstream | 137668 | 19202230 ~ 19203687 (+) | True | G49104 |
| TU58192 | lncRNA | downstream | 55308 | 19400651 ~ 19400883 (+) | True | G49214 |
| TU58299 | lncRNA | downstream | 269374 | 19614717 ~ 19617317 (+) | False | G49316 |
| TU58301 | lncRNA | downstream | 269374 | 19614717 ~ 19617317 (+) | False | G49316 |
| TU58302 | lncRNA | downstream | 269374 | 19614717 ~ 19617317 (+) | False | G49316 |
| TU58303 | lncRNA | downstream | 269374 | 19614717 ~ 19617317 (+) | True | G49316 |
| XM_034302903.1 | mRNA | upstream | 1718 | 19318825 ~ 19339637 (+) | False | rab11fip5a |
| XM_026939917.2 | mRNA | upstream | 1718 | 19318987 ~ 19339637 (+) | True | rab11fip5a |
| XM_026939926.2 | mRNA | upstream | 1718 | 19318987 ~ 19339637 (+) | False | rab11fip5a |
| XM_026939935.2 | mRNA | upstream | 1718 | 19318988 ~ 19339637 (+) | False | rab11fip5a |
| XM_034302904.1 | mRNA | upstream | 1718 | 19319812 ~ 19339637 (+) | False | rab11fip5a |
| XM_026945763.2 | mRNA | downstream | 57589 | 19402932 ~ 19410091 (+) | True | cdc25b |
| XM_026945771.2 | mRNA | downstream | 57592 | 19402935 ~ 19410091 (+) | False | cdc25b |
| XM_026933896.2 | mRNA | downstream | 67328 | 19412671 ~ 19426321 (+) | True | ap5s1 |
| XM_026933276.2 | mRNA | downstream | 170978 | 19516321 ~ 19604187 (+) | True | gfra4a |
| XM_026933336.2 | mRNA | downstream | 429404 | 19774747 ~ 19786571 (+) | True | ky |
| TU55884 | other | upstream | 3104707 | 16234535 ~ 16236648 (+) | False | lrrc18a |
| XR_003404341.2 | other | upstream | 3268288 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
| TU55689 | other | upstream | 3269435 | 16070759 ~ 16071920 (+) | False | cxcl18a.1 |
| TU55629 | other | upstream | 3544151 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_004577898.1 | other | upstream | 4973909 | 14361367 ~ 14367446 (+) | False | cgas |
| TU59013 | other | downstream | 1229630 | 20574973 ~ 20575479 (+) | True | G49862 |
| trnae-cuc_10 | other | downstream | 1660107 | 21005450 ~ 21005519 (+) | True | trnae-cuc_10 |
| TU60121 | other | downstream | 2676064 | 22021407 ~ 22023811 (+) | True | wu:fj16a03 |
| TU60615 | other | downstream | 3438985 | 22784328 ~ 22786505 (+) | True | G51271 |
| XR_003404579.1 | other | downstream | 3768842 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
