Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU58488 |
| length | 266 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G49481 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 19688592 ~ 19688877 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58214 | lncRNA | downstream | 259867 | 19427746 ~ 19428725 (-) | True | G49232 |
| TU58193 | lncRNA | downstream | 287729 | 19400664 ~ 19400863 (-) | True | G49215 |
| TU58155 | lncRNA | downstream | 436729 | 19251593 ~ 19251863 (-) | True | G49184 |
| TU58066 | lncRNA | downstream | 497977 | 19190327 ~ 19190615 (-) | True | G49108 |
| TU58001 | lncRNA | downstream | 635841 | 19052527 ~ 19052751 (-) | True | G49053 |
| TU58495 | lncRNA | upstream | 25288 | 19714165 ~ 19715420 (-) | True | G49484 |
| TU58497 | lncRNA | upstream | 25541 | 19714418 ~ 19715420 (-) | False | G49484 |
| TU58494 | lncRNA | upstream | 58817 | 19747694 ~ 19751354 (-) | False | slc4a11 |
| TU58636 | lncRNA | upstream | 206821 | 19895698 ~ 19970294 (-) | False | G49584 |
| TU58643 | lncRNA | upstream | 269567 | 19958444 ~ 19964311 (-) | True | G49584 |
| XM_034302619.1 | mRNA | downstream | 20933 | 19614717 ~ 19667659 (-) | True | atrn |
| XM_034302620.1 | mRNA | downstream | 20934 | 19614717 ~ 19667658 (-) | False | atrn |
| XM_026944643.2 | mRNA | downstream | 313011 | 19374309 ~ 19375581 (-) | False | noto |
| XM_034303050.1 | mRNA | downstream | 313011 | 19374309 ~ 19375581 (-) | True | noto |
| XM_026942251.2 | mRNA | downstream | 325612 | 19357615 ~ 19362980 (-) | True | emx1 |
| XM_026941796.2 | mRNA | upstream | 12202 | 19701079 ~ 19713506 (-) | True | rpia |
| XM_026943527.2 | mRNA | upstream | 27723 | 19716600 ~ 19768134 (-) | False | slc4a11 |
| XM_026943495.2 | mRNA | upstream | 27723 | 19716600 ~ 19768134 (-) | False | slc4a11 |
| XM_026943511.2 | mRNA | upstream | 27723 | 19716600 ~ 19768133 (-) | False | slc4a11 |
| XM_026943503.2 | mRNA | upstream | 27723 | 19716600 ~ 19763473 (-) | False | slc4a11 |
| XR_004577815.1 | other | downstream | 20931 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58169 | other | downstream | 368859 | 19316487 ~ 19319733 (-) | True | G49195 |
| TU57664 | other | downstream | 1075191 | 18330368 ~ 18613401 (-) | True | lrmda |
| TU56951 | other | downstream | 2027208 | 17657581 ~ 17661384 (-) | False | col13a1 |
| XR_004577786.1 | other | downstream | 2114170 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
| TU58944 | other | upstream | 669057 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | upstream | 669111 | 20357988 ~ 20369097 (-) | False | gng2 |
| TU58946 | other | upstream | 669111 | 20357988 ~ 20369429 (-) | False | gng2 |
| TU59887 | other | upstream | 1922897 | 21611774 ~ 21614267 (-) | False | plekhh2 |
| trnai-uau | other | upstream | 2207307 | 21896184 ~ 21896277 (-) | True | trnai-uau |
