Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU58541 |
| length | 971 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G49518 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 19972587 ~ 19999686 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58551 | lncRNA | upstream | 17992 | 19912821 ~ 19954595 (+) | True | G49522 |
| TU58539 | lncRNA | upstream | 29512 | 19933042 ~ 19943075 (+) | True | G49517 |
| TU58299 | lncRNA | upstream | 355270 | 19614717 ~ 19617317 (+) | False | G49316 |
| TU58301 | lncRNA | upstream | 355270 | 19614717 ~ 19617317 (+) | False | G49316 |
| TU58302 | lncRNA | upstream | 355270 | 19614717 ~ 19617317 (+) | False | G49316 |
| TU58721 | lncRNA | downstream | 121362 | 20121048 ~ 20183193 (+) | True | G49630 |
| TU58738 | lncRNA | downstream | 156215 | 20155901 ~ 20191144 (+) | True | G49643 |
| TU58889 | lncRNA | downstream | 392681 | 20392367 ~ 20392587 (+) | False | pprc1 |
| TU59001 | lncRNA | downstream | 524130 | 20523816 ~ 20524049 (+) | True | G49853 |
| TU59014 | lncRNA | downstream | 581115 | 20580801 ~ 20585500 (+) | True | G49863 |
| XM_026935755.2 | mRNA | upstream | 2281 | 19933055 ~ 19970306 (+) | True | fgfr3 |
| XM_026935745.2 | mRNA | upstream | 2281 | 19933056 ~ 19970306 (+) | False | fgfr3 |
| XM_026935766.2 | mRNA | upstream | 2281 | 19933056 ~ 19970306 (+) | False | fgfr3 |
| XM_026935785.2 | mRNA | upstream | 2281 | 19933056 ~ 19970306 (+) | False | fgfr3 |
| XM_026935793.2 | mRNA | upstream | 2281 | 19933056 ~ 19970306 (+) | False | fgfr3 |
| XM_034303067.1 | mRNA | downstream | 43023 | 20042709 ~ 20064115 (+) | False | nsd2 |
| XM_026944793.2 | mRNA | downstream | 43026 | 20042712 ~ 20064115 (+) | False | nsd2 |
| XM_026944785.2 | mRNA | downstream | 43438 | 20043124 ~ 20064115 (+) | False | nsd2 |
| XM_034303066.1 | mRNA | downstream | 43438 | 20043124 ~ 20064115 (+) | False | nsd2 |
| XM_026944803.2 | mRNA | downstream | 43684 | 20043370 ~ 20064115 (+) | True | nsd2 |
| XR_003403773.2 | other | upstream | 616489 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| TU59013 | other | downstream | 575287 | 20574973 ~ 20575479 (+) | True | G49862 |
| trnae-cuc_10 | other | downstream | 1005764 | 21005450 ~ 21005519 (+) | True | trnae-cuc_10 |
| TU60121 | other | downstream | 2021721 | 22021407 ~ 22023811 (+) | True | wu:fj16a03 |
| TU60615 | other | downstream | 2784642 | 22784328 ~ 22786505 (+) | True | G51271 |
| XR_003404579.1 | other | downstream | 3114499 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
