Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU58721 |
| length | 484 |
| lncRNA type | read_through |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G49630 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 20121048 ~ 20183193 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58541 | lncRNA | upstream | 121362 | 19972587 ~ 19999686 (+) | True | G49518 |
| TU58551 | lncRNA | upstream | 166453 | 19912821 ~ 19954595 (+) | True | G49522 |
| TU58539 | lncRNA | upstream | 177973 | 19933042 ~ 19943075 (+) | True | G49517 |
| TU58299 | lncRNA | upstream | 503731 | 19614717 ~ 19617317 (+) | False | G49316 |
| TU58889 | lncRNA | downstream | 209174 | 20392367 ~ 20392587 (+) | False | pprc1 |
| TU59001 | lncRNA | downstream | 340623 | 20523816 ~ 20524049 (+) | True | G49853 |
| TU59014 | lncRNA | downstream | 397608 | 20580801 ~ 20585500 (+) | True | G49863 |
| TU59015 | lncRNA | downstream | 402411 | 20585604 ~ 20589230 (+) | True | G49864 |
| TU59007 | lncRNA | downstream | 436745 | 20619938 ~ 20716297 (+) | True | G49857 |
| XM_034303067.1 | mRNA | upstream | 56933 | 20042709 ~ 20064115 (+) | False | nsd2 |
| XM_026944793.2 | mRNA | upstream | 56933 | 20042712 ~ 20064115 (+) | False | nsd2 |
| XM_026944785.2 | mRNA | upstream | 56933 | 20043124 ~ 20064115 (+) | False | nsd2 |
| XM_034303066.1 | mRNA | upstream | 56933 | 20043124 ~ 20064115 (+) | False | nsd2 |
| XM_026944803.2 | mRNA | upstream | 56933 | 20043370 ~ 20064115 (+) | True | nsd2 |
| XM_026935332.2 | mRNA | downstream | 12281 | 20195474 ~ 20205571 (+) | True | enpep |
| XM_026933582.2 | mRNA | downstream | 29267 | 20212460 ~ 20214679 (+) | True | lamtor3 |
| XM_026936694.2 | mRNA | downstream | 75543 | 20258736 ~ 20261786 (+) | True | commd8 |
| XM_026945692.2 | mRNA | downstream | 199153 | 20382346 ~ 20392601 (+) | True | pprc1 |
| XM_026932427.2 | mRNA | downstream | 212564 | 20395757 ~ 20407070 (+) | True | oga |
| XR_003403773.2 | other | upstream | 764950 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| TU59013 | other | downstream | 391780 | 20574973 ~ 20575479 (+) | True | G49862 |
| trnae-cuc_10 | other | downstream | 822257 | 21005450 ~ 21005519 (+) | True | trnae-cuc_10 |
| TU60121 | other | downstream | 1838214 | 22021407 ~ 22023811 (+) | True | wu:fj16a03 |
| TU60615 | other | downstream | 2601135 | 22784328 ~ 22786505 (+) | True | G51271 |
| XR_003404579.1 | other | downstream | 2930992 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
