Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU58937 |
| length | 376 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G49806 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 20463893 ~ 20464950 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58921 | lncRNA | downstream | 103442 | 20297118 ~ 20360451 (-) | True | G49797 |
| XR_003403784.2 | lncRNA | downstream | 112417 | 20349410 ~ 20351476 (-) | True | LOC113537651 |
| TU58849 | lncRNA | downstream | 236314 | 20224966 ~ 20227579 (-) | False | atp10d |
| TU58804 | lncRNA | downstream | 247463 | 20215653 ~ 20216430 (-) | True | G49700 |
| TU58755 | lncRNA | downstream | 258300 | 20182053 ~ 20205593 (-) | False | metap1 |
| TU58979 | lncRNA | upstream | 7527 | 20472477 ~ 20473295 (-) | True | G49836 |
| TU58984 | lncRNA | upstream | 12758 | 20477708 ~ 20478688 (-) | True | G49841 |
| TU59102 | lncRNA | upstream | 34583 | 20499533 ~ 20500791 (-) | True | G49941 |
| TU59106 | lncRNA | upstream | 35846 | 20500796 ~ 20502665 (-) | True | G49942 |
| TU59107 | lncRNA | upstream | 39287 | 20504237 ~ 20504970 (-) | True | G49943 |
| XM_026937086.2 | mRNA | downstream | 2791 | 20445420 ~ 20461102 (-) | False | sufu |
| XM_026937100.2 | mRNA | downstream | 2792 | 20445420 ~ 20461101 (-) | False | sufu |
| XM_026937093.2 | mRNA | downstream | 2792 | 20445420 ~ 20461101 (-) | False | sufu |
| XM_026937079.2 | mRNA | downstream | 2792 | 20445420 ~ 20461101 (-) | True | sufu |
| XM_026937107.2 | mRNA | downstream | 3080 | 20445420 ~ 20460813 (-) | False | sufu |
| XM_034302973.1 | mRNA | upstream | 89543 | 20554493 ~ 20573783 (-) | False | desi2 |
| XM_034302972.1 | mRNA | upstream | 89543 | 20554493 ~ 20565432 (-) | False | desi2 |
| XM_026937225.2 | mRNA | upstream | 89543 | 20554493 ~ 20565432 (-) | True | desi2 |
| XM_034302990.1 | mRNA | upstream | 154982 | 20619932 ~ 20629167 (-) | False | zbtb18 |
| XM_026943039.2 | mRNA | upstream | 154982 | 20619932 ~ 20627284 (-) | False | zbtb18 |
| TU58946 | other | downstream | 94464 | 20357988 ~ 20369429 (-) | False | gng2 |
| TU58944 | other | downstream | 94796 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | downstream | 94796 | 20357988 ~ 20369097 (-) | False | gng2 |
| XR_004577815.1 | other | downstream | 796232 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58169 | other | downstream | 1144160 | 19316487 ~ 19319733 (-) | True | G49195 |
| TU59887 | other | upstream | 1146824 | 21611774 ~ 21614267 (-) | False | plekhh2 |
| trnai-uau | other | upstream | 1431234 | 21896184 ~ 21896277 (-) | True | trnai-uau |
| TU60082 | other | upstream | 1484905 | 21949855 ~ 21950189 (-) | True | G50837 |
| TU60345 | other | upstream | 1570335 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| XR_003404067.2 | other | upstream | 2309405 | 22774355 ~ 22788783 (-) | False | znf318 |
