Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59354 |
| length | 801 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | camkmt |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 21025733 ~ 21118964 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59334 | lncRNA | upstream | 74528 | 20963262 ~ 21043534 (+) | True | G50145 |
| TU59323 | lncRNA | upstream | 167071 | 20950570 ~ 20950991 (+) | True | G50140 |
| TU59007 | lncRNA | upstream | 401765 | 20619938 ~ 20716297 (+) | True | G49857 |
| TU59015 | lncRNA | upstream | 528832 | 20585604 ~ 20589230 (+) | True | G49864 |
| TU59014 | lncRNA | upstream | 532562 | 20580801 ~ 20585500 (+) | True | G49863 |
| TU59475 | lncRNA | downstream | 60744 | 21179606 ~ 21179811 (+) | True | G50284 |
| TU59491 | lncRNA | downstream | 79415 | 21198277 ~ 21198508 (+) | True | G50297 |
| TU59504 | lncRNA | downstream | 87532 | 21206394 ~ 21210115 (+) | True | G50310 |
| TU59506 | lncRNA | downstream | 91975 | 21210837 ~ 21213946 (+) | True | G50311 |
| TU59584 | lncRNA | downstream | 194342 | 21313204 ~ 21350033 (+) | False | G50384 |
| XM_026939903.2 | mRNA | upstream | 107472 | 21002369 ~ 21010590 (+) | True | slc3a1 |
| XM_034301821.1 | mRNA | upstream | 121684 | 20986889 ~ 20996378 (+) | True | ppm1ba |
| XM_026942324.2 | mRNA | upstream | 232350 | 20877886 ~ 20885712 (+) | True | abcg8 |
| XM_026938582.2 | mRNA | upstream | 262360 | 20802372 ~ 20855702 (+) | False | cep170aa |
| XM_026943202.2 | mRNA | downstream | 62073 | 21180935 ~ 21183818 (+) | True | six3a |
| XM_026939385.2 | mRNA | downstream | 361837 | 21480699 ~ 21501499 (+) | True | socs5b |
| XM_026939376.2 | mRNA | downstream | 361840 | 21480702 ~ 21501499 (+) | False | socs5b |
| XM_026934272.2 | mRNA | downstream | 398924 | 21517786 ~ 21522535 (+) | True | prop1 |
| XM_026934281.2 | mRNA | downstream | 398924 | 21517786 ~ 21522535 (+) | False | prop1 |
| trnae-cuc_10 | other | upstream | 112543 | 21005450 ~ 21005519 (+) | True | trnae-cuc_10 |
| TU59013 | other | upstream | 542583 | 20574973 ~ 20575479 (+) | True | G49862 |
| XR_004577568.1 | other | upstream | 1761964 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| TU60121 | other | downstream | 902545 | 22021407 ~ 22023811 (+) | True | wu:fj16a03 |
| TU60615 | other | downstream | 1665466 | 22784328 ~ 22786505 (+) | True | G51271 |
| XR_003404579.1 | other | downstream | 1995323 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
| TU60962 | other | downstream | 2335566 | 23454428 ~ 23455549 (+) | True | G51562 |
| TU61166 | other | downstream | 2578170 | 23697032 ~ 23697294 (+) | True | G51749 |
