Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59405 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G50215 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 21051163 ~ 21051414 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59178 | lncRNA | downstream | 301685 | 20744419 ~ 20749478 (-) | True | G50002 |
| TU59128 | lncRNA | downstream | 527865 | 20523064 ~ 20523298 (-) | True | G49959 |
| TU59126 | lncRNA | downstream | 529099 | 20521694 ~ 20522064 (-) | True | G49957 |
| TU59108 | lncRNA | downstream | 544754 | 20505801 ~ 20506409 (-) | True | G49944 |
| TU59107 | lncRNA | downstream | 546193 | 20504237 ~ 20504970 (-) | True | G49943 |
| TU59425 | lncRNA | upstream | 26034 | 21077448 ~ 21077702 (-) | True | G50235 |
| TU59432 | lncRNA | upstream | 32359 | 21083773 ~ 21084005 (-) | True | G50242 |
| TU59450 | lncRNA | upstream | 58554 | 21109968 ~ 21110177 (-) | True | G50260 |
| TU59451 | lncRNA | upstream | 59701 | 21111115 ~ 21111352 (-) | True | G50261 |
| TU59452 | lncRNA | upstream | 64002 | 21115416 ~ 21115615 (-) | True | G50262 |
| XM_034302848.1 | mRNA | downstream | 25548 | 21010692 ~ 21025615 (-) | True | prepl |
| XM_034302948.1 | mRNA | downstream | 113526 | 20886598 ~ 20937637 (-) | False | lrpprc |
| XM_034302947.1 | mRNA | downstream | 113526 | 20886598 ~ 20937637 (-) | True | lrpprc |
| XM_026942334.2 | mRNA | downstream | 173319 | 20868389 ~ 20877844 (-) | True | abcg5 |
| XM_034302630.1 | mRNA | downstream | 185919 | 20855695 ~ 20865244 (-) | False | dync2li1 |
| XM_026933654.2 | mRNA | upstream | 155603 | 21207017 ~ 21210374 (-) | True | six2a |
| XM_026943393.2 | mRNA | upstream | 225371 | 21276785 ~ 21331058 (-) | True | srbd1 |
| XM_026939868.2 | mRNA | upstream | 296796 | 21348210 ~ 21380478 (-) | True | epas1b |
| XM_026939881.2 | mRNA | upstream | 298343 | 21349757 ~ 21384116 (-) | False | epas1b |
| XM_026939875.2 | mRNA | upstream | 298343 | 21349757 ~ 21384116 (-) | False | epas1b |
| TU58946 | other | downstream | 681734 | 20357988 ~ 20369429 (-) | False | gng2 |
| TU58944 | other | downstream | 682066 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | downstream | 682066 | 20357988 ~ 20369097 (-) | False | gng2 |
| XR_004577815.1 | other | downstream | 1383502 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58169 | other | downstream | 1731430 | 19316487 ~ 19319733 (-) | True | G49195 |
| TU59887 | other | upstream | 560360 | 21611774 ~ 21614267 (-) | False | plekhh2 |
| trnai-uau | other | upstream | 844770 | 21896184 ~ 21896277 (-) | True | trnai-uau |
| TU60082 | other | upstream | 898441 | 21949855 ~ 21950189 (-) | True | G50837 |
| TU60345 | other | upstream | 983871 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| XR_003404067.2 | other | upstream | 1722941 | 22774355 ~ 22788783 (-) | False | znf318 |
