Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59450 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G50260 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 21109968 ~ 21110177 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59432 | lncRNA | downstream | 25963 | 21083773 ~ 21084005 (-) | True | G50242 |
| TU59425 | lncRNA | downstream | 32266 | 21077448 ~ 21077702 (-) | True | G50235 |
| TU59405 | lncRNA | downstream | 58554 | 21051163 ~ 21051414 (-) | True | G50215 |
| TU59178 | lncRNA | downstream | 360490 | 20744419 ~ 20749478 (-) | True | G50002 |
| TU59128 | lncRNA | downstream | 586670 | 20523064 ~ 20523298 (-) | True | G49959 |
| TU59451 | lncRNA | upstream | 938 | 21111115 ~ 21111352 (-) | True | G50261 |
| TU59452 | lncRNA | upstream | 5239 | 21115416 ~ 21115615 (-) | True | G50262 |
| TU59454 | lncRNA | upstream | 6470 | 21116647 ~ 21117362 (-) | True | G50264 |
| TU59482 | lncRNA | upstream | 73653 | 21183830 ~ 21184436 (-) | True | G50290 |
| TU59489 | lncRNA | upstream | 80358 | 21190535 ~ 21190742 (-) | True | G50295 |
| XM_034302848.1 | mRNA | downstream | 84353 | 21010692 ~ 21025615 (-) | True | prepl |
| XM_034302948.1 | mRNA | downstream | 172331 | 20886598 ~ 20937637 (-) | False | lrpprc |
| XM_034302947.1 | mRNA | downstream | 172331 | 20886598 ~ 20937637 (-) | True | lrpprc |
| XM_026942334.2 | mRNA | downstream | 232124 | 20868389 ~ 20877844 (-) | True | abcg5 |
| XM_026933981.2 | mRNA | downstream | 244724 | 20857389 ~ 20865244 (-) | False | dync2li1 |
| XM_026933654.2 | mRNA | upstream | 96840 | 21207017 ~ 21210374 (-) | True | six2a |
| XM_026943393.2 | mRNA | upstream | 166608 | 21276785 ~ 21331058 (-) | True | srbd1 |
| XM_026939868.2 | mRNA | upstream | 238033 | 21348210 ~ 21380478 (-) | True | epas1b |
| XM_026939881.2 | mRNA | upstream | 239580 | 21349757 ~ 21384116 (-) | False | epas1b |
| XM_026939875.2 | mRNA | upstream | 239580 | 21349757 ~ 21384116 (-) | False | epas1b |
| TU58946 | other | downstream | 740539 | 20357988 ~ 20369429 (-) | False | gng2 |
| TU58944 | other | downstream | 740871 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | downstream | 740871 | 20357988 ~ 20369097 (-) | False | gng2 |
| XR_004577815.1 | other | downstream | 1442307 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58169 | other | downstream | 1790235 | 19316487 ~ 19319733 (-) | True | G49195 |
| TU59887 | other | upstream | 501597 | 21611774 ~ 21614267 (-) | False | plekhh2 |
| trnai-uau | other | upstream | 786007 | 21896184 ~ 21896277 (-) | True | trnai-uau |
| TU60082 | other | upstream | 839678 | 21949855 ~ 21950189 (-) | True | G50837 |
| TU60345 | other | upstream | 925108 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| XR_003404067.2 | other | upstream | 1664178 | 22774355 ~ 22788783 (-) | False | znf318 |
