Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59489 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G50295 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 21190535 ~ 21190742 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59482 | lncRNA | downstream | 6099 | 21183830 ~ 21184436 (-) | True | G50290 |
| TU59454 | lncRNA | downstream | 73173 | 21116647 ~ 21117362 (-) | True | G50264 |
| TU59452 | lncRNA | downstream | 74920 | 21115416 ~ 21115615 (-) | True | G50262 |
| TU59451 | lncRNA | downstream | 79183 | 21111115 ~ 21111352 (-) | True | G50261 |
| TU59450 | lncRNA | downstream | 80358 | 21109968 ~ 21110177 (-) | True | G50260 |
| TU59503 | lncRNA | upstream | 13934 | 21204676 ~ 21205961 (-) | True | G50309 |
| TU59513 | lncRNA | upstream | 25916 | 21216658 ~ 21216886 (-) | True | G50318 |
| TU59640 | lncRNA | upstream | 155400 | 21346142 ~ 21385497 (-) | False | G50433 |
| TU59644 | lncRNA | upstream | 155400 | 21346142 ~ 21385497 (-) | True | G50433 |
| TU59831 | lncRNA | upstream | 197001 | 21387743 ~ 21422129 (-) | True | prkceb |
| XM_034302848.1 | mRNA | downstream | 164920 | 21010692 ~ 21025615 (-) | True | prepl |
| XM_034302948.1 | mRNA | downstream | 252898 | 20886598 ~ 20937637 (-) | False | lrpprc |
| XM_034302947.1 | mRNA | downstream | 252898 | 20886598 ~ 20937637 (-) | True | lrpprc |
| XM_026942334.2 | mRNA | downstream | 312691 | 20868389 ~ 20877844 (-) | True | abcg5 |
| XM_026933981.2 | mRNA | downstream | 325291 | 20857389 ~ 20865244 (-) | False | dync2li1 |
| XM_026933654.2 | mRNA | upstream | 16275 | 21207017 ~ 21210374 (-) | True | six2a |
| XM_026943393.2 | mRNA | upstream | 86043 | 21276785 ~ 21331058 (-) | True | srbd1 |
| XM_026939868.2 | mRNA | upstream | 157468 | 21348210 ~ 21380478 (-) | True | epas1b |
| XM_026939881.2 | mRNA | upstream | 159015 | 21349757 ~ 21384116 (-) | False | epas1b |
| XM_026939875.2 | mRNA | upstream | 159015 | 21349757 ~ 21384116 (-) | False | epas1b |
| TU58946 | other | downstream | 821106 | 20357988 ~ 20369429 (-) | False | gng2 |
| TU58944 | other | downstream | 821438 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | downstream | 821438 | 20357988 ~ 20369097 (-) | False | gng2 |
| XR_004577815.1 | other | downstream | 1522874 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58169 | other | downstream | 1870802 | 19316487 ~ 19319733 (-) | True | G49195 |
| TU59887 | other | upstream | 421032 | 21611774 ~ 21614267 (-) | False | plekhh2 |
| trnai-uau | other | upstream | 705442 | 21896184 ~ 21896277 (-) | True | trnai-uau |
| TU60082 | other | upstream | 759113 | 21949855 ~ 21950189 (-) | True | G50837 |
| TU60345 | other | upstream | 844543 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| XR_003404067.2 | other | upstream | 1583613 | 22774355 ~ 22788783 (-) | False | znf318 |
