Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59506 |
| length | 778 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G50311 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 21210837 ~ 21213946 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59504 | lncRNA | upstream | 722 | 21206394 ~ 21210115 (+) | True | G50310 |
| TU59491 | lncRNA | upstream | 12329 | 21198277 ~ 21198508 (+) | True | G50297 |
| TU59475 | lncRNA | upstream | 31026 | 21179606 ~ 21179811 (+) | True | G50284 |
| TU59354 | lncRNA | upstream | 91975 | 21118062 ~ 21118862 (+) | False | camkmt |
| TU59334 | lncRNA | upstream | 167303 | 20963262 ~ 21043534 (+) | True | G50145 |
| TU59584 | lncRNA | downstream | 99258 | 21313204 ~ 21350033 (+) | False | G50384 |
| TU59582 | lncRNA | downstream | 132219 | 21346165 ~ 21350033 (+) | True | G50384 |
| TU59746 | lncRNA | downstream | 302336 | 21516282 ~ 21517755 (+) | True | G50528 |
| XR_004577869.1 | lncRNA | downstream | 311491 | 21525437 ~ 21526067 (+) | True | LOC117596875 |
| TU59732 | lncRNA | downstream | 353469 | 21567415 ~ 21574053 (+) | True | G50516 |
| XM_026943202.2 | mRNA | upstream | 27019 | 21180935 ~ 21183818 (+) | True | six3a |
| XM_026936906.2 | mRNA | upstream | 91873 | 21025733 ~ 21118964 (+) | True | camkmt |
| XM_026936915.2 | mRNA | upstream | 91873 | 21087941 ~ 21118964 (+) | False | camkmt |
| XM_026939903.2 | mRNA | upstream | 200247 | 21002369 ~ 21010590 (+) | True | slc3a1 |
| XM_034301821.1 | mRNA | upstream | 214459 | 20986889 ~ 20996378 (+) | True | ppm1ba |
| XM_026939385.2 | mRNA | downstream | 266753 | 21480699 ~ 21501499 (+) | True | socs5b |
| XM_026939376.2 | mRNA | downstream | 266756 | 21480702 ~ 21501499 (+) | False | socs5b |
| XM_026934272.2 | mRNA | downstream | 303840 | 21517786 ~ 21522535 (+) | True | prop1 |
| XM_026934281.2 | mRNA | downstream | 303840 | 21517786 ~ 21522535 (+) | False | prop1 |
| XM_026934261.2 | mRNA | downstream | 317325 | 21531271 ~ 21560099 (+) | True | ttc7a |
| trnae-cuc_10 | other | upstream | 205318 | 21005450 ~ 21005519 (+) | True | trnae-cuc_10 |
| TU59013 | other | upstream | 635358 | 20574973 ~ 20575479 (+) | True | G49862 |
| XR_004577569.1 | other | upstream | 1854739 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| TU60121 | other | downstream | 807461 | 22021407 ~ 22023811 (+) | True | wu:fj16a03 |
| TU60615 | other | downstream | 1570382 | 22784328 ~ 22786505 (+) | True | G51271 |
| XR_003404579.1 | other | downstream | 1900239 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
| TU60962 | other | downstream | 2240482 | 23454428 ~ 23455549 (+) | True | G51562 |
| TU61166 | other | downstream | 2483086 | 23697032 ~ 23697294 (+) | True | G51749 |
