Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59853 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G50619 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 21512605 ~ 21512822 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59831 | lncRNA | downstream | 90476 | 21387743 ~ 21422129 (-) | True | prkceb |
| TU59640 | lncRNA | downstream | 127108 | 21346142 ~ 21385497 (-) | False | G50433 |
| TU59644 | lncRNA | downstream | 127108 | 21346142 ~ 21385497 (-) | True | G50433 |
| TU59513 | lncRNA | downstream | 295719 | 21216658 ~ 21216886 (-) | True | G50318 |
| TU59503 | lncRNA | downstream | 306644 | 21204676 ~ 21205961 (-) | True | G50309 |
| TU59858 | lncRNA | upstream | 2330 | 21515152 ~ 21515642 (-) | True | G50624 |
| TU59860 | lncRNA | upstream | 4993 | 21517815 ~ 21518078 (-) | True | G50626 |
| TU59884 | lncRNA | upstream | 93606 | 21606428 ~ 21610897 (-) | True | G50647 |
| TU59895 | lncRNA | upstream | 146836 | 21659658 ~ 21737394 (-) | True | G50656 |
| XR_004577805.1 | lncRNA | upstream | 254992 | 21767814 ~ 21786645 (-) | True | LOC117596829 |
| XM_026942151.2 | mRNA | downstream | 33900 | 21392447 ~ 21478705 (-) | False | prkceb |
| XM_026942143.2 | mRNA | downstream | 33900 | 21392447 ~ 21478705 (-) | False | prkceb |
| XM_026939881.2 | mRNA | downstream | 128489 | 21349757 ~ 21384116 (-) | False | epas1b |
| XM_026939875.2 | mRNA | downstream | 128489 | 21349757 ~ 21384116 (-) | False | epas1b |
| XM_026939868.2 | mRNA | downstream | 132127 | 21348210 ~ 21380478 (-) | True | epas1b |
| XM_034302943.1 | mRNA | upstream | 9386 | 21522208 ~ 21526777 (-) | False | mcfd2 |
| XM_034302941.1 | mRNA | upstream | 9386 | 21522208 ~ 21526755 (-) | False | mcfd2 |
| XM_026934302.2 | mRNA | upstream | 9386 | 21522208 ~ 21526722 (-) | True | mcfd2 |
| XM_026934294.2 | mRNA | upstream | 9386 | 21522208 ~ 21526712 (-) | False | mcfd2 |
| XM_034302942.1 | mRNA | upstream | 9386 | 21522208 ~ 21526684 (-) | False | mcfd2 |
| TU58946 | other | downstream | 1143176 | 20357988 ~ 20369429 (-) | False | gng2 |
| TU58944 | other | downstream | 1143508 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | downstream | 1143508 | 20357988 ~ 20369097 (-) | False | gng2 |
| XR_004577815.1 | other | downstream | 1844944 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58169 | other | downstream | 2192872 | 19316487 ~ 19319733 (-) | True | G49195 |
| TU59887 | other | upstream | 98952 | 21611774 ~ 21614267 (-) | False | plekhh2 |
| trnai-uau | other | upstream | 383362 | 21896184 ~ 21896277 (-) | True | trnai-uau |
| TU60082 | other | upstream | 437033 | 21949855 ~ 21950189 (-) | True | G50837 |
| TU60345 | other | upstream | 522463 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| XR_003404067.2 | other | upstream | 1261533 | 22774355 ~ 22788783 (-) | False | znf318 |
