Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU60121 |
| length | 1228 |
| RNA type | TUCP |
| GC content | 0.38 |
| exon number | 3 |
| gene id | wu:fj16a03 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 22020322 ~ 22023811 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003404631.2 | lncRNA | upstream | 5918 | 22004718 ~ 22015489 (+) | True | LOC113545609 |
| TU60026 | lncRNA | upstream | 146392 | 21874813 ~ 21875015 (+) | True | G50783 |
| TU60015 | lncRNA | upstream | 152379 | 21868824 ~ 21869028 (+) | True | G50772 |
| TU59732 | lncRNA | upstream | 447354 | 21567415 ~ 21574053 (+) | True | G50516 |
| XR_004577869.1 | lncRNA | upstream | 495340 | 21525437 ~ 21526067 (+) | True | LOC117596875 |
| TU60131 | lncRNA | downstream | 11671 | 22035482 ~ 22041152 (+) | True | G50880 |
| TU60136 | lncRNA | downstream | 11671 | 22035482 ~ 22041152 (+) | False | G50880 |
| TU60140 | lncRNA | downstream | 11671 | 22035482 ~ 22041152 (+) | False | G50880 |
| XR_003404546.2 | lncRNA | downstream | 203634 | 22227445 ~ 22229448 (+) | True | LOC113544795 |
| TU60214 | lncRNA | downstream | 228024 | 22251835 ~ 22252048 (+) | True | G50936 |
| XM_026932110.2 | mRNA | upstream | 50447 | 21967741 ~ 21970960 (+) | True | LOC113537563 |
| XM_026932766.2 | mRNA | upstream | 61008 | 21954905 ~ 21960399 (+) | True | LOC113537982 |
| XM_026932775.2 | mRNA | upstream | 61008 | 21954905 ~ 21960399 (+) | False | LOC113537982 |
| XM_026933215.2 | mRNA | upstream | 103739 | 21914549 ~ 21917668 (+) | True | hcar1-3 |
| XM_026945610.2 | mRNA | upstream | 116298 | 21899556 ~ 21905109 (+) | True | haao |
| XM_026943156.2 | mRNA | downstream | 220298 | 22244109 ~ 22265419 (+) | True | prph2b |
| XM_034302654.1 | mRNA | downstream | 461499 | 22485310 ~ 22552752 (+) | False | LOC113538739 |
| XM_026934084.2 | mRNA | downstream | 461500 | 22485311 ~ 22546038 (+) | False | LOC113538739 |
| XM_026934075.2 | mRNA | downstream | 461501 | 22485312 ~ 22552752 (+) | False | LOC113538739 |
| XM_026934094.2 | mRNA | downstream | 461502 | 22485313 ~ 22546449 (+) | False | LOC113538739 |
| trnae-cuc_10 | other | upstream | 1015888 | 21005450 ~ 21005519 (+) | True | trnae-cuc_10 |
| TU59013 | other | upstream | 1445928 | 20574973 ~ 20575479 (+) | True | G49862 |
| XR_004577568.1 | other | upstream | 2665309 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| TU60615 | other | downstream | 760517 | 22784328 ~ 22786505 (+) | True | G51271 |
| XR_003404579.1 | other | downstream | 1090374 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
| TU60962 | other | downstream | 1430617 | 23454428 ~ 23455549 (+) | True | G51562 |
| TU61166 | other | downstream | 1673221 | 23697032 ~ 23697294 (+) | True | G51749 |
| TU61214 | other | downstream | 1769869 | 23793680 ~ 23805495 (+) | False | slc29a3 |
