Item | Value |
---|---|
RNA id | TU60844 |
length | 379 |
lncRNA type | inter_gene |
GC content | 0.37 |
exon number | 1 |
gene id | G51462 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047597.1 |
NCBI id | CM018543.1 |
chromosome length | 33776708 |
location | 23070343 ~ 23070721 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0006820 | anion transport | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU60769 | lncRNA | downstream | 179836 | 22890297 ~ 22890507 (-) | True | G51390 |
TU60768 | lncRNA | downstream | 180069 | 22890059 ~ 22890274 (-) | True | G51389 |
TU60643 | lncRNA | downstream | 327071 | 22647350 ~ 22743272 (-) | True | G51289 |
TU60626 | lncRNA | downstream | 462306 | 22605547 ~ 22608037 (-) | True | G51276 |
TU60484 | lncRNA | downstream | 503816 | 22565799 ~ 22566527 (-) | False | LOC113541574 |
XR_003403951.2 | lncRNA | upstream | 145127 | 23215848 ~ 23218757 (-) | True | LOC113539667 |
TU60916 | lncRNA | upstream | 189475 | 23260196 ~ 23266336 (-) | True | G51523 |
TU60957 | lncRNA | upstream | 342959 | 23413680 ~ 23413941 (-) | True | G51557 |
TU60980 | lncRNA | upstream | 386779 | 23457500 ~ 23457991 (-) | True | G51577 |
TU60982 | lncRNA | upstream | 396225 | 23466946 ~ 23470699 (-) | True | G51579 |
XM_034303119.1 | mRNA | downstream | 21219 | 23032198 ~ 23049124 (-) | True | phf10 |
XM_026937353.2 | mRNA | downstream | 92700 | 22964720 ~ 22977643 (-) | False | fam120b |
XM_026937352.2 | mRNA | downstream | 92700 | 22964720 ~ 22977643 (-) | True | fam120b |
XM_026937357.2 | mRNA | downstream | 135482 | 22927645 ~ 22934861 (-) | True | ppm1g |
XM_026937407.2 | mRNA | downstream | 146603 | 22913819 ~ 22923740 (-) | True | apmap |
XM_026941612.2 | mRNA | upstream | 601698 | 23672419 ~ 23679981 (-) | True | c1d |
XM_034302271.1 | mRNA | upstream | 601698 | 23672419 ~ 23679731 (-) | False | c1d |
XM_026942047.2 | mRNA | upstream | 656431 | 23727152 ~ 23750761 (-) | False | kifc1 |
XM_026942038.2 | mRNA | upstream | 656431 | 23727152 ~ 23750761 (-) | True | kifc1 |
XM_034303048.1 | mRNA | upstream | 767218 | 23837939 ~ 23840860 (-) | True | mgme1 |
XR_003404067.2 | other | downstream | 281560 | 22774355 ~ 22788783 (-) | False | znf318 |
XR_003404066.2 | other | downstream | 281560 | 22774355 ~ 22788783 (-) | False | znf318 |
TU60345 | other | downstream | 968960 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
TU60082 | other | downstream | 1120154 | 21949855 ~ 21950189 (-) | True | G50837 |
trnai-uau | other | downstream | 1174066 | 21896184 ~ 21896277 (-) | True | trnai-uau |
TU60979 | other | upstream | 377187 | 23447908 ~ 23454217 (-) | True | G51576 |
XR_004577819.1 | other | upstream | 946543 | 24017264 ~ 24040100 (-) | False | mlh1 |
XR_003404244.2 | other | upstream | 1382398 | 24453119 ~ 24651847 (-) | False | lyst |
XR_004577838.1 | other | upstream | 1400982 | 24471703 ~ 24651847 (-) | False | lyst |
XR_004577835.1 | other | upstream | 1611525 | 24682246 ~ 24735887 (-) | False | herc4 |