Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU60957 |
| length | 262 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G51557 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 23413680 ~ 23413941 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60916 | lncRNA | downstream | 147344 | 23260196 ~ 23266336 (-) | True | G51523 |
| XR_003403951.2 | lncRNA | downstream | 194923 | 23215848 ~ 23218757 (-) | True | LOC113539667 |
| TU60844 | lncRNA | downstream | 342959 | 23070343 ~ 23070721 (-) | True | G51462 |
| TU60769 | lncRNA | downstream | 523173 | 22890297 ~ 22890507 (-) | True | G51390 |
| TU60768 | lncRNA | downstream | 523406 | 22890059 ~ 22890274 (-) | True | G51389 |
| TU60980 | lncRNA | upstream | 43559 | 23457500 ~ 23457991 (-) | True | G51577 |
| TU60982 | lncRNA | upstream | 53005 | 23466946 ~ 23470699 (-) | True | G51579 |
| TU60983 | lncRNA | upstream | 57726 | 23471667 ~ 23472219 (-) | True | G51580 |
| TU60984 | lncRNA | upstream | 58358 | 23472299 ~ 23474091 (-) | True | G51581 |
| TU60987 | lncRNA | upstream | 68182 | 23482123 ~ 23482354 (-) | True | G51584 |
| XM_034303119.1 | mRNA | downstream | 364556 | 23032198 ~ 23049124 (-) | True | phf10 |
| XM_026937353.2 | mRNA | downstream | 436037 | 22964720 ~ 22977643 (-) | False | fam120b |
| XM_026937352.2 | mRNA | downstream | 436037 | 22964720 ~ 22977643 (-) | True | fam120b |
| XM_026937357.2 | mRNA | downstream | 478819 | 22927645 ~ 22934861 (-) | True | ppm1g |
| XM_026937407.2 | mRNA | downstream | 489940 | 22913819 ~ 22923740 (-) | True | apmap |
| XM_026941612.2 | mRNA | upstream | 258478 | 23672419 ~ 23679981 (-) | True | c1d |
| XM_034302271.1 | mRNA | upstream | 258478 | 23672419 ~ 23679731 (-) | False | c1d |
| XM_026942047.2 | mRNA | upstream | 313211 | 23727152 ~ 23750761 (-) | False | kifc1 |
| XM_026942038.2 | mRNA | upstream | 313211 | 23727152 ~ 23750761 (-) | True | kifc1 |
| XM_034303048.1 | mRNA | upstream | 423998 | 23837939 ~ 23840860 (-) | True | mgme1 |
| XR_003404067.2 | other | downstream | 624897 | 22774355 ~ 22788783 (-) | False | znf318 |
| XR_003404066.2 | other | downstream | 624897 | 22774355 ~ 22788783 (-) | False | znf318 |
| TU60345 | other | downstream | 1312297 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| TU60082 | other | downstream | 1463491 | 21949855 ~ 21950189 (-) | True | G50837 |
| trnai-uau | other | downstream | 1517403 | 21896184 ~ 21896277 (-) | True | trnai-uau |
| TU60979 | other | upstream | 33967 | 23447908 ~ 23454217 (-) | True | G51576 |
| XR_004577819.1 | other | upstream | 603323 | 24017264 ~ 24040100 (-) | False | mlh1 |
| XR_003404244.2 | other | upstream | 1039178 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | upstream | 1057762 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577835.1 | other | upstream | 1268305 | 24682246 ~ 24735887 (-) | False | herc4 |
