Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU60980 |
| length | 492 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G51577 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 23457500 ~ 23457991 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60957 | lncRNA | downstream | 43559 | 23413680 ~ 23413941 (-) | True | G51557 |
| TU60916 | lncRNA | downstream | 191164 | 23260196 ~ 23266336 (-) | True | G51523 |
| XR_003403951.2 | lncRNA | downstream | 238743 | 23215848 ~ 23218757 (-) | True | LOC113539667 |
| TU60844 | lncRNA | downstream | 386779 | 23070343 ~ 23070721 (-) | True | G51462 |
| TU60769 | lncRNA | downstream | 566993 | 22890297 ~ 22890507 (-) | True | G51390 |
| TU60982 | lncRNA | upstream | 8955 | 23466946 ~ 23470699 (-) | True | G51579 |
| TU60983 | lncRNA | upstream | 13676 | 23471667 ~ 23472219 (-) | True | G51580 |
| TU60984 | lncRNA | upstream | 14308 | 23472299 ~ 23474091 (-) | True | G51581 |
| TU60987 | lncRNA | upstream | 24132 | 23482123 ~ 23482354 (-) | True | G51584 |
| TU61003 | lncRNA | upstream | 50538 | 23508529 ~ 23508739 (-) | True | G51600 |
| XM_034303119.1 | mRNA | downstream | 408376 | 23032198 ~ 23049124 (-) | True | phf10 |
| XM_026937353.2 | mRNA | downstream | 479857 | 22964720 ~ 22977643 (-) | False | fam120b |
| XM_026937352.2 | mRNA | downstream | 479857 | 22964720 ~ 22977643 (-) | True | fam120b |
| XM_026937357.2 | mRNA | downstream | 522639 | 22927645 ~ 22934861 (-) | True | ppm1g |
| XM_026937407.2 | mRNA | downstream | 533760 | 22913819 ~ 22923740 (-) | True | apmap |
| XM_026941612.2 | mRNA | upstream | 214428 | 23672419 ~ 23679981 (-) | True | c1d |
| XM_034302271.1 | mRNA | upstream | 214428 | 23672419 ~ 23679731 (-) | False | c1d |
| XM_026942047.2 | mRNA | upstream | 269161 | 23727152 ~ 23750761 (-) | False | kifc1 |
| XM_026942038.2 | mRNA | upstream | 269161 | 23727152 ~ 23750761 (-) | True | kifc1 |
| XM_034303048.1 | mRNA | upstream | 379948 | 23837939 ~ 23840860 (-) | True | mgme1 |
| TU60979 | other | downstream | 3283 | 23447908 ~ 23454217 (-) | True | G51576 |
| XR_003404067.2 | other | downstream | 668717 | 22774355 ~ 22788783 (-) | False | znf318 |
| XR_003404066.2 | other | downstream | 668717 | 22774355 ~ 22788783 (-) | False | znf318 |
| TU60345 | other | downstream | 1356117 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| TU60082 | other | downstream | 1507311 | 21949855 ~ 21950189 (-) | True | G50837 |
| XR_004577819.1 | other | upstream | 559273 | 24017264 ~ 24040100 (-) | False | mlh1 |
| XR_003404244.2 | other | upstream | 995128 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | upstream | 1013712 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577835.1 | other | upstream | 1224255 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404274.1 | other | upstream | 2452027 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
