Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU61654 |
| length | 259 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G52154 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 24563956 ~ 24564286 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU61566 | lncRNA | downstream | 147530 | 24415319 ~ 24416426 (-) | True | G52076 |
| TU61589 | lncRNA | downstream | 171210 | 24387381 ~ 24392746 (-) | True | G52097 |
| XR_004577852.1 | lncRNA | downstream | 294817 | 24260352 ~ 24269139 (-) | True | LOC117596863 |
| TU61407 | lncRNA | downstream | 427161 | 24136506 ~ 24136795 (-) | True | G51943 |
| TU61381 | lncRNA | downstream | 434105 | 24108351 ~ 24129851 (-) | False | LOC113545393 |
| TU61657 | lncRNA | upstream | 77810 | 24642096 ~ 24642916 (-) | True | G52157 |
| TU61618 | lncRNA | upstream | 85831 | 24650117 ~ 24651824 (-) | False | lyst |
| TU61766 | lncRNA | upstream | 174542 | 24738828 ~ 24742668 (-) | True | G52259 |
| TU61790 | lncRNA | upstream | 223227 | 24787513 ~ 24787859 (-) | True | G52282 |
| TU61791 | lncRNA | upstream | 224605 | 24788891 ~ 24789095 (-) | True | G52283 |
| XM_026939259.2 | mRNA | downstream | 247528 | 24191772 ~ 24316428 (-) | False | arid4b |
| XM_026939260.2 | mRNA | downstream | 247528 | 24191772 ~ 24316428 (-) | False | arid4b |
| XM_026939256.2 | mRNA | downstream | 247528 | 24191772 ~ 24316428 (-) | False | arid4b |
| XM_026939262.2 | mRNA | downstream | 247529 | 24190418 ~ 24316427 (-) | False | arid4b |
| XM_026939265.2 | mRNA | upstream | 97699 | 24661985 ~ 24735868 (-) | False | herc4 |
| XM_034302737.1 | mRNA | upstream | 104864 | 24669150 ~ 24735877 (-) | True | herc4 |
| XM_034302738.1 | mRNA | upstream | 112788 | 24677074 ~ 24735877 (-) | False | herc4 |
| XM_034302739.1 | mRNA | upstream | 136544 | 24700830 ~ 24735888 (-) | False | herc4 |
| XM_026939252.2 | mRNA | upstream | 248688 | 24812974 ~ 25090822 (-) | True | LOC113542016 |
| XR_004577819.1 | other | downstream | 523856 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU60979 | other | downstream | 1109739 | 23447908 ~ 23454217 (-) | True | G51576 |
| XR_003404067.2 | other | downstream | 1775173 | 22774355 ~ 22788783 (-) | False | znf318 |
| XR_003404066.2 | other | downstream | 1775173 | 22774355 ~ 22788783 (-) | False | znf318 |
| TU60345 | other | downstream | 2462573 | 22035285 ~ 22101383 (-) | False | LOC113540944 |
| XR_004577835.1 | other | upstream | 117960 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404274.1 | other | upstream | 1345732 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| TU63465 | other | upstream | 2973490 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 3868934 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 4637646 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
