Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU61706 |
| length | 773 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G52204 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 24800517 ~ 24801289 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU61694 | lncRNA | upstream | 13747 | 24786562 ~ 24786770 (+) | True | G52192 |
| TU61693 | lncRNA | upstream | 15533 | 24784769 ~ 24784984 (+) | True | G52191 |
| TU61692 | lncRNA | upstream | 16223 | 24784070 ~ 24784294 (+) | True | G52190 |
| TU61690 | lncRNA | upstream | 18633 | 24781656 ~ 24781884 (+) | True | G52188 |
| TU61689 | lncRNA | upstream | 18897 | 24781368 ~ 24781620 (+) | True | G52187 |
| TU61724 | lncRNA | downstream | 29250 | 24830539 ~ 24833402 (+) | True | G52219 |
| TU61746 | lncRNA | downstream | 80401 | 24881690 ~ 24882611 (+) | True | G52241 |
| TU61738 | lncRNA | downstream | 152500 | 24953789 ~ 24959989 (+) | True | G52233 |
| TU61741 | lncRNA | downstream | 173027 | 24974316 ~ 24983742 (+) | True | G52236 |
| TU61861 | lncRNA | downstream | 424398 | 25225687 ~ 25231677 (+) | True | G52348 |
| XM_026939335.2 | mRNA | upstream | 360062 | 24416490 ~ 24440455 (+) | False | cacul1 |
| XM_026939336.2 | mRNA | upstream | 360062 | 24416490 ~ 24440455 (+) | False | cacul1 |
| XM_026939338.2 | mRNA | upstream | 360062 | 24416519 ~ 24440455 (+) | True | cacul1 |
| XM_026939337.2 | mRNA | upstream | 360062 | 24416519 ~ 24440455 (+) | False | cacul1 |
| XM_034302681.1 | mRNA | upstream | 398063 | 24368528 ~ 24402454 (+) | False | b3galnt2 |
| XM_026939276.2 | mRNA | downstream | 381864 | 25183153 ~ 25191848 (+) | True | gpatch11 |
| XM_026939267.2 | mRNA | downstream | 403850 | 25205139 ~ 25239169 (+) | True | tsnax |
| XM_026939268.2 | mRNA | downstream | 403850 | 25205139 ~ 25239169 (+) | False | tsnax |
| XM_026939266.2 | mRNA | downstream | 403850 | 25205139 ~ 25239169 (+) | False | tsnax |
| XM_034301836.1 | mRNA | downstream | 556100 | 25357389 ~ 25364017 (+) | True | LOC113541878 |
| TU61306 | other | upstream | 742630 | 24055241 ~ 24057887 (+) | True | LOC113540163 |
| TU61214 | other | upstream | 995022 | 23793680 ~ 23805495 (+) | False | slc29a3 |
| TU61166 | other | upstream | 1103223 | 23697032 ~ 23697294 (+) | True | G51749 |
| TU60962 | other | upstream | 1344968 | 23454428 ~ 23455549 (+) | True | G51562 |
| XR_003404579.1 | other | upstream | 1685478 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
| TU63018 | other | downstream | 2184689 | 26985978 ~ 26992711 (+) | True | G53328 |
| XR_003404257.2 | other | downstream | 2396620 | 27197909 ~ 27207245 (+) | False | znf451 |
| XR_004577886.1 | other | downstream | 2396620 | 27197909 ~ 27206395 (+) | False | znf451 |
| XR_003404258.2 | other | downstream | 2396620 | 27197909 ~ 27206370 (+) | True | znf451 |
| TU63410 | other | downstream | 3646088 | 28447377 ~ 28448311 (+) | True | G53692 |
