Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU61791 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G52283 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 24788891 ~ 24789095 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU61790 | lncRNA | downstream | 1032 | 24787513 ~ 24787859 (-) | True | G52282 |
| TU61766 | lncRNA | downstream | 46223 | 24738828 ~ 24742668 (-) | True | G52259 |
| TU61618 | lncRNA | downstream | 137067 | 24650117 ~ 24651824 (-) | False | lyst |
| TU61657 | lncRNA | downstream | 145975 | 24642096 ~ 24642916 (-) | True | G52157 |
| TU61647 | lncRNA | downstream | 183144 | 24548671 ~ 24605747 (-) | True | G52147 |
| TU61808 | lncRNA | upstream | 90402 | 24879497 ~ 24881956 (-) | True | G52300 |
| TU61812 | lncRNA | upstream | 131577 | 24920672 ~ 24923852 (-) | True | G52304 |
| TU61818 | lncRNA | upstream | 213025 | 25002120 ~ 25010303 (-) | True | G52310 |
| TU61895 | lncRNA | upstream | 396740 | 25185835 ~ 25189496 (-) | True | G52373 |
| TU61982 | lncRNA | upstream | 545787 | 25334882 ~ 25335127 (-) | True | G52438 |
| XM_034302739.1 | mRNA | downstream | 53003 | 24700830 ~ 24735888 (-) | False | herc4 |
| XM_034302737.1 | mRNA | downstream | 53014 | 24669150 ~ 24735877 (-) | True | herc4 |
| XM_034302738.1 | mRNA | downstream | 53014 | 24677074 ~ 24735877 (-) | False | herc4 |
| XM_026939265.2 | mRNA | downstream | 53023 | 24661985 ~ 24735868 (-) | False | herc4 |
| XM_026939237.2 | mRNA | downstream | 137044 | 24461218 ~ 24651847 (-) | True | lyst |
| XM_026939252.2 | mRNA | upstream | 23879 | 24812974 ~ 25090822 (-) | True | LOC113542016 |
| XM_026939333.2 | mRNA | upstream | 519211 | 25308306 ~ 25330202 (-) | True | dnajc12 |
| XM_026939334.2 | mRNA | upstream | 519211 | 25308306 ~ 25330164 (-) | False | dnajc12 |
| XM_026939496.2 | mRNA | upstream | 705581 | 25494676 ~ 25504756 (-) | True | msh6 |
| XM_026939162.2 | mRNA | upstream | 896589 | 25685684 ~ 25697851 (-) | True | LOC113541965 |
| XR_004577835.1 | other | downstream | 53004 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 137044 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 137044 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 748791 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU60979 | other | downstream | 1334674 | 23447908 ~ 23454217 (-) | True | G51576 |
| XR_003404274.1 | other | upstream | 1120923 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| TU63465 | other | upstream | 2748681 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 3644125 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 4412837 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 4890316 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
