Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62328 |
| length | 399 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G52714 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 25730445 ~ 25730870 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62152 | lncRNA | downstream | 55129 | 25675076 ~ 25675316 (-) | True | G52564 |
| TU62139 | lncRNA | downstream | 58455 | 25669966 ~ 25671990 (-) | True | G52555 |
| TU62095 | lncRNA | downstream | 135538 | 25594236 ~ 25594907 (-) | True | G52532 |
| TU62072 | lncRNA | downstream | 216639 | 25513417 ~ 25513806 (-) | True | G52509 |
| TU62032 | lncRNA | downstream | 270066 | 25459833 ~ 25460379 (-) | True | G52477 |
| TU62330 | lncRNA | upstream | 5708 | 25736578 ~ 25738936 (-) | True | G52716 |
| TU62375 | lncRNA | upstream | 112142 | 25843012 ~ 25846113 (-) | False | G52759 |
| TU62373 | lncRNA | upstream | 112415 | 25843285 ~ 25846892 (-) | True | G52759 |
| TU62388 | lncRNA | upstream | 135016 | 25865886 ~ 25866087 (-) | True | G52771 |
| TU62392 | lncRNA | upstream | 158638 | 25889508 ~ 25921064 (-) | True | G52775 |
| XM_026939162.2 | mRNA | downstream | 32594 | 25685684 ~ 25697851 (-) | True | LOC113541965 |
| XM_026939496.2 | mRNA | downstream | 225689 | 25494676 ~ 25504756 (-) | True | msh6 |
| XM_026939333.2 | mRNA | downstream | 400243 | 25308306 ~ 25330202 (-) | True | dnajc12 |
| XM_026939334.2 | mRNA | downstream | 400281 | 25308306 ~ 25330164 (-) | False | dnajc12 |
| XM_026939252.2 | mRNA | downstream | 639623 | 24812974 ~ 25090822 (-) | True | LOC113542016 |
| XM_034302898.1 | mRNA | upstream | 19183 | 25750053 ~ 25770046 (-) | True | mertka |
| XM_034302899.1 | mRNA | upstream | 19183 | 25750053 ~ 25770044 (-) | False | mertka |
| XM_026939300.2 | mRNA | upstream | 42017 | 25772887 ~ 25791400 (-) | True | lhcgr |
| XM_034302838.1 | mRNA | upstream | 192160 | 25923030 ~ 25966974 (-) | False | anapc1 |
| XM_026939278.2 | mRNA | upstream | 192160 | 25923030 ~ 25966974 (-) | True | anapc1 |
| XR_004577835.1 | other | downstream | 994558 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 1078598 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 1078598 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 1690345 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU60979 | other | downstream | 2276228 | 23447908 ~ 23454217 (-) | True | G51576 |
| XR_003404274.1 | other | upstream | 179148 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| TU63465 | other | upstream | 1806906 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 2702350 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 3471062 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 3948541 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
