Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62330 |
| length | 674 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G52716 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 25736578 ~ 25738936 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62328 | lncRNA | downstream | 5708 | 25730445 ~ 25730870 (-) | True | G52714 |
| TU62152 | lncRNA | downstream | 61262 | 25675076 ~ 25675316 (-) | True | G52564 |
| TU62139 | lncRNA | downstream | 64588 | 25669966 ~ 25671990 (-) | True | G52555 |
| TU62095 | lncRNA | downstream | 141671 | 25594236 ~ 25594907 (-) | True | G52532 |
| TU62072 | lncRNA | downstream | 222772 | 25513417 ~ 25513806 (-) | True | G52509 |
| TU62375 | lncRNA | upstream | 104076 | 25843012 ~ 25846113 (-) | False | G52759 |
| TU62373 | lncRNA | upstream | 104349 | 25843285 ~ 25846892 (-) | True | G52759 |
| TU62388 | lncRNA | upstream | 126950 | 25865886 ~ 25866087 (-) | True | G52771 |
| TU62392 | lncRNA | upstream | 150572 | 25889508 ~ 25921064 (-) | True | G52775 |
| TU62409 | lncRNA | upstream | 176526 | 25915462 ~ 25916951 (-) | True | G52792 |
| XM_026939162.2 | mRNA | downstream | 38727 | 25685684 ~ 25697851 (-) | True | LOC113541965 |
| XM_026939496.2 | mRNA | downstream | 231822 | 25494676 ~ 25504756 (-) | True | msh6 |
| XM_026939333.2 | mRNA | downstream | 406376 | 25308306 ~ 25330202 (-) | True | dnajc12 |
| XM_026939334.2 | mRNA | downstream | 406414 | 25308306 ~ 25330164 (-) | False | dnajc12 |
| XM_026939252.2 | mRNA | downstream | 645756 | 24812974 ~ 25090822 (-) | True | LOC113542016 |
| XM_034302898.1 | mRNA | upstream | 11117 | 25750053 ~ 25770046 (-) | True | mertka |
| XM_034302899.1 | mRNA | upstream | 11117 | 25750053 ~ 25770044 (-) | False | mertka |
| XM_026939300.2 | mRNA | upstream | 33951 | 25772887 ~ 25791400 (-) | True | lhcgr |
| XM_034302838.1 | mRNA | upstream | 184094 | 25923030 ~ 25966974 (-) | False | anapc1 |
| XM_026939278.2 | mRNA | upstream | 184094 | 25923030 ~ 25966974 (-) | True | anapc1 |
| XR_004577835.1 | other | downstream | 1000691 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 1084731 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 1084731 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 1696478 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU60979 | other | downstream | 2282361 | 23447908 ~ 23454217 (-) | True | G51576 |
| XR_003404274.1 | other | upstream | 171082 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| TU63465 | other | upstream | 1798840 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 2694284 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 3462996 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 3940475 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
