Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62635 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G52981 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26116888 ~ 26117206 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62392 | lncRNA | downstream | 195824 | 25889508 ~ 25921064 (-) | True | G52775 |
| TU62409 | lncRNA | downstream | 199937 | 25915462 ~ 25916951 (-) | True | G52792 |
| TU62388 | lncRNA | downstream | 250801 | 25865886 ~ 25866087 (-) | True | G52771 |
| TU62373 | lncRNA | downstream | 269996 | 25843285 ~ 25846892 (-) | True | G52759 |
| TU62375 | lncRNA | downstream | 270775 | 25843012 ~ 25846113 (-) | False | G52759 |
| TU62707 | lncRNA | upstream | 133149 | 26250355 ~ 26286280 (-) | True | G53047 |
| TU62704 | lncRNA | upstream | 136139 | 26253345 ~ 26288933 (-) | True | G53046 |
| TU62709 | lncRNA | upstream | 141224 | 26258430 ~ 26262823 (-) | True | G53049 |
| TU62708 | lncRNA | upstream | 156710 | 26273916 ~ 26276092 (-) | True | G53048 |
| TU62711 | lncRNA | upstream | 169718 | 26286924 ~ 26355796 (-) | True | G53051 |
| XM_034302953.1 | mRNA | downstream | 6479 | 26076592 ~ 26110409 (-) | True | tmem63ba |
| XM_026939067.2 | mRNA | downstream | 43134 | 26066974 ~ 26073754 (-) | True | LOC113541884 |
| XM_034301629.1 | mRNA | downstream | 44899 | 26066974 ~ 26071989 (-) | False | LOC113541884 |
| XM_026939523.2 | mRNA | downstream | 105108 | 26003139 ~ 26011780 (-) | True | LOC113542170 |
| XM_026939525.2 | mRNA | downstream | 110794 | 26001430 ~ 26006094 (-) | False | LOC113542170 |
| XM_034302699.1 | mRNA | upstream | 232923 | 26350129 ~ 26351151 (-) | True | LOC117596837 |
| XM_026939275.2 | mRNA | upstream | 248972 | 26366178 ~ 26467381 (-) | True | wdr11 |
| XM_026939066.2 | mRNA | upstream | 411800 | 26529006 ~ 26620986 (-) | True | plpp4 |
| XM_026939462.1 | mRNA | upstream | 512044 | 26629250 ~ 26629878 (-) | True | lhb |
| XM_026939344.2 | mRNA | upstream | 522343 | 26639549 ~ 26667669 (-) | True | arfgef3 |
| XR_003404274.1 | other | downstream | 206769 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 1381001 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 1465041 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 1465041 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 2076788 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU63465 | other | upstream | 1420570 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 2316014 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 3084726 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 3562205 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 3994625 | 30111831 ~ 30122655 (-) | True | G55209 |
