Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62704 |
| length | 941 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G53046 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26253345 ~ 26288933 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62635 | lncRNA | downstream | 136139 | 26116888 ~ 26117206 (-) | True | G52981 |
| TU62392 | lncRNA | downstream | 332281 | 25889508 ~ 25921064 (-) | True | G52775 |
| TU62409 | lncRNA | downstream | 336394 | 25915462 ~ 25916951 (-) | True | G52792 |
| TU62388 | lncRNA | downstream | 387258 | 25865886 ~ 25866087 (-) | True | G52771 |
| TU62373 | lncRNA | downstream | 406453 | 25843285 ~ 25846892 (-) | True | G52759 |
| TU62725 | lncRNA | upstream | 76205 | 26365138 ~ 26365358 (-) | True | G53065 |
| XR_003404245.1 | lncRNA | upstream | 216834 | 26505767 ~ 26506244 (-) | True | LOC113542010 |
| TU62841 | lncRNA | upstream | 238336 | 26527269 ~ 26528340 (-) | True | G53175 |
| TU62844 | lncRNA | upstream | 245874 | 26534807 ~ 26535023 (-) | True | G53178 |
| TU62845 | lncRNA | upstream | 246150 | 26535083 ~ 26535294 (-) | True | G53179 |
| XM_034302953.1 | mRNA | downstream | 142936 | 26076592 ~ 26110409 (-) | True | tmem63ba |
| XM_026939067.2 | mRNA | downstream | 179591 | 26066974 ~ 26073754 (-) | True | LOC113541884 |
| XM_034301629.1 | mRNA | downstream | 181356 | 26066974 ~ 26071989 (-) | False | LOC113541884 |
| XM_026939523.2 | mRNA | downstream | 241565 | 26003139 ~ 26011780 (-) | True | LOC113542170 |
| XM_026939524.2 | mRNA | downstream | 249036 | 26001430 ~ 26004309 (-) | False | LOC113542170 |
| XM_034302699.1 | mRNA | upstream | 61196 | 26350129 ~ 26351151 (-) | True | LOC117596837 |
| XM_026939275.2 | mRNA | upstream | 77245 | 26366178 ~ 26467381 (-) | True | wdr11 |
| XM_026939066.2 | mRNA | upstream | 240073 | 26529006 ~ 26620986 (-) | True | plpp4 |
| XM_026939462.1 | mRNA | upstream | 340317 | 26629250 ~ 26629878 (-) | True | lhb |
| XM_026939344.2 | mRNA | upstream | 350616 | 26639549 ~ 26667669 (-) | True | arfgef3 |
| XR_003404274.1 | other | downstream | 343226 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 1517458 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 1601498 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 1601498 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 2213245 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU63465 | other | upstream | 1248843 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 2144287 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 2912999 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 3390478 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 3822898 | 30111831 ~ 30122655 (-) | True | G55209 |
