Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62743 |
| length | 287 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G53083 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26538234 ~ 26538520 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62742 | lncRNA | upstream | 767 | 26537262 ~ 26537467 (+) | True | G53082 |
| TU62740 | lncRNA | upstream | 4732 | 26528407 ~ 26533502 (+) | True | G53080 |
| TU62533 | lncRNA | upstream | 168974 | 26366192 ~ 26369260 (+) | True | G52885 |
| TU62532 | lncRNA | upstream | 174501 | 26363439 ~ 26363733 (+) | True | G52884 |
| TU62506 | lncRNA | upstream | 193932 | 26256642 ~ 26344302 (+) | True | G52858 |
| TU62750 | lncRNA | downstream | 13555 | 26552075 ~ 26552285 (+) | True | G53090 |
| TU62751 | lncRNA | downstream | 13998 | 26552518 ~ 26552722 (+) | True | G53091 |
| TU62752 | lncRNA | downstream | 14416 | 26552936 ~ 26553152 (+) | True | G53092 |
| TU62838 | lncRNA | downstream | 260178 | 26798698 ~ 26799518 (+) | True | G53172 |
| TU62953 | lncRNA | downstream | 395418 | 26933938 ~ 26934265 (+) | True | G53280 |
| XM_034302731.1 | mRNA | upstream | 249332 | 26250140 ~ 26288902 (+) | False | fgfr2 |
| XM_026939463.2 | mRNA | downstream | 93045 | 26631565 ~ 26635213 (+) | True | LOC113542124 |
| XM_026939472.2 | mRNA | downstream | 132372 | 26670892 ~ 26684508 (+) | True | fbxo9 |
| XM_026939446.2 | mRNA | downstream | 188729 | 26727249 ~ 26736006 (+) | True | eloal |
| XM_026939470.2 | mRNA | downstream | 217140 | 26755660 ~ 26798512 (+) | True | lrrc1 |
| XM_034302700.1 | mRNA | downstream | 264675 | 26803195 ~ 26809508 (+) | True | LOC117596838 |
| TU61306 | other | upstream | 2480347 | 24055241 ~ 24057887 (+) | True | LOC113540163 |
| TU61214 | other | upstream | 2732739 | 23793680 ~ 23805495 (+) | False | slc29a3 |
| TU61166 | other | upstream | 2840940 | 23697032 ~ 23697294 (+) | True | G51749 |
| TU60962 | other | upstream | 3082685 | 23454428 ~ 23455549 (+) | True | G51562 |
| XR_003404579.1 | other | upstream | 3423195 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
| TU63018 | other | downstream | 447458 | 26985978 ~ 26992711 (+) | True | G53328 |
| XR_003404257.2 | other | downstream | 659389 | 27197909 ~ 27207245 (+) | False | znf451 |
| XR_004577886.1 | other | downstream | 659389 | 27197909 ~ 27206395 (+) | False | znf451 |
| XR_003404258.2 | other | downstream | 659389 | 27197909 ~ 27206370 (+) | True | znf451 |
| TU63410 | other | downstream | 1908857 | 28447377 ~ 28448311 (+) | True | G53692 |
