Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62838 |
| length | 821 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G53172 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26798698 ~ 26799518 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62752 | lncRNA | upstream | 245546 | 26552936 ~ 26553152 (+) | True | G53092 |
| TU62751 | lncRNA | upstream | 245976 | 26552518 ~ 26552722 (+) | True | G53091 |
| TU62750 | lncRNA | upstream | 246413 | 26552075 ~ 26552285 (+) | True | G53090 |
| TU62743 | lncRNA | upstream | 260178 | 26538234 ~ 26538520 (+) | True | G53083 |
| TU62742 | lncRNA | upstream | 261231 | 26537262 ~ 26537467 (+) | True | G53082 |
| TU62953 | lncRNA | downstream | 134420 | 26933938 ~ 26934265 (+) | True | G53280 |
| TU63053 | lncRNA | downstream | 218443 | 27017961 ~ 27018846 (+) | True | G53363 |
| TU63006 | lncRNA | downstream | 234331 | 27033849 ~ 27036808 (+) | True | G53316 |
| XR_003404272.2 | lncRNA | downstream | 256246 | 27055764 ~ 27056998 (+) | True | LOC113542178 |
| XR_004577887.1 | lncRNA | downstream | 259360 | 27058878 ~ 27068180 (+) | True | LOC117596898 |
| XM_026939470.2 | mRNA | upstream | 186 | 26755660 ~ 26798512 (+) | True | lrrc1 |
| XM_026939446.2 | mRNA | upstream | 62692 | 26727249 ~ 26736006 (+) | True | eloal |
| XM_026939472.2 | mRNA | upstream | 114190 | 26670892 ~ 26684508 (+) | True | fbxo9 |
| XM_026939463.2 | mRNA | upstream | 163485 | 26631565 ~ 26635213 (+) | True | LOC113542124 |
| XM_034302731.1 | mRNA | upstream | 509796 | 26250140 ~ 26288902 (+) | False | fgfr2 |
| XM_034302700.1 | mRNA | downstream | 3677 | 26803195 ~ 26809508 (+) | True | LOC117596838 |
| XM_026939159.2 | mRNA | downstream | 30706 | 26830224 ~ 26865137 (+) | True | mlip |
| XM_026939160.2 | mRNA | downstream | 30706 | 26830224 ~ 26865137 (+) | False | mlip |
| XM_026939529.2 | mRNA | downstream | 73710 | 26873228 ~ 26887079 (+) | True | fam83b |
| XM_026939484.2 | mRNA | downstream | 105979 | 26905497 ~ 26923251 (+) | True | hcrtr2 |
| TU61306 | other | upstream | 2740811 | 24055241 ~ 24057887 (+) | True | LOC113540163 |
| TU61214 | other | upstream | 2993203 | 23793680 ~ 23805495 (+) | False | slc29a3 |
| TU61166 | other | upstream | 3101404 | 23697032 ~ 23697294 (+) | True | G51749 |
| TU60962 | other | upstream | 3343149 | 23454428 ~ 23455549 (+) | True | G51562 |
| XR_003404579.1 | other | upstream | 3683659 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
| TU63018 | other | downstream | 186460 | 26985978 ~ 26992711 (+) | True | G53328 |
| XR_003404257.2 | other | downstream | 398391 | 27197909 ~ 27207245 (+) | False | znf451 |
| XR_004577886.1 | other | downstream | 398391 | 27197909 ~ 27206395 (+) | False | znf451 |
| XR_003404258.2 | other | downstream | 398391 | 27197909 ~ 27206370 (+) | True | znf451 |
| TU63410 | other | downstream | 1647859 | 28447377 ~ 28448311 (+) | True | G53692 |
