Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62849 |
| length | 214 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G53183 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26547296 ~ 26547509 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62848 | lncRNA | downstream | 4074 | 26542964 ~ 26543222 (-) | True | G53182 |
| TU62847 | lncRNA | downstream | 7500 | 26539529 ~ 26539796 (-) | True | G53181 |
| TU62845 | lncRNA | downstream | 12002 | 26535083 ~ 26535294 (-) | True | G53179 |
| TU62844 | lncRNA | downstream | 12273 | 26534807 ~ 26535023 (-) | True | G53178 |
| TU62841 | lncRNA | downstream | 18956 | 26527269 ~ 26528340 (-) | True | G53175 |
| TU62877 | lncRNA | upstream | 121104 | 26668613 ~ 26668821 (-) | True | G53210 |
| TU62871 | lncRNA | upstream | 160193 | 26707702 ~ 26708397 (-) | True | G53204 |
| TU62883 | lncRNA | upstream | 172567 | 26720076 ~ 26720660 (-) | True | G53216 |
| XR_003404260.2 | lncRNA | upstream | 191034 | 26738543 ~ 26741519 (-) | True | LOC113542110 |
| TU62919 | lncRNA | upstream | 251170 | 26798679 ~ 26799518 (-) | False | G53250 |
| XM_026939275.2 | mRNA | downstream | 79915 | 26366178 ~ 26467381 (-) | True | wdr11 |
| XM_034302699.1 | mRNA | downstream | 196145 | 26350129 ~ 26351151 (-) | True | LOC117596837 |
| XM_034302953.1 | mRNA | downstream | 436887 | 26076592 ~ 26110409 (-) | True | tmem63ba |
| XM_026939067.2 | mRNA | downstream | 473542 | 26066974 ~ 26073754 (-) | True | LOC113541884 |
| XM_026939462.1 | mRNA | upstream | 81741 | 26629250 ~ 26629878 (-) | True | lhb |
| XM_026939344.2 | mRNA | upstream | 92040 | 26639549 ~ 26667669 (-) | True | arfgef3 |
| XM_026939345.2 | mRNA | upstream | 93419 | 26640928 ~ 26668018 (-) | False | arfgef3 |
| XM_026939221.2 | mRNA | upstream | 139616 | 26687125 ~ 26706755 (-) | True | elovl5 |
| XM_026939535.2 | mRNA | upstream | 161010 | 26708519 ~ 26719590 (-) | True | gclc |
| XR_003404274.1 | other | downstream | 637177 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 1811409 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 1895449 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 1895449 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 2507196 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU63465 | other | upstream | 990267 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 1885711 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 2654423 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 3131902 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 3564322 | 30111831 ~ 30122655 (-) | True | G55209 |
