Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62871 |
| length | 696 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G53204 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26707702 ~ 26708397 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62877 | lncRNA | downstream | 38881 | 26668613 ~ 26668821 (-) | True | G53210 |
| TU62849 | lncRNA | downstream | 160193 | 26547296 ~ 26547509 (-) | True | G53183 |
| TU62848 | lncRNA | downstream | 164480 | 26542964 ~ 26543222 (-) | True | G53182 |
| TU62847 | lncRNA | downstream | 167906 | 26539529 ~ 26539796 (-) | True | G53181 |
| TU62845 | lncRNA | downstream | 172408 | 26535083 ~ 26535294 (-) | True | G53179 |
| TU62883 | lncRNA | upstream | 11679 | 26720076 ~ 26720660 (-) | True | G53216 |
| XR_003404260.2 | lncRNA | upstream | 30146 | 26738543 ~ 26741519 (-) | True | LOC113542110 |
| TU62919 | lncRNA | upstream | 90282 | 26798679 ~ 26799518 (-) | False | G53250 |
| TU62918 | lncRNA | upstream | 90331 | 26798728 ~ 26799608 (-) | True | G53250 |
| TU63501 | lncRNA | upstream | 159261 | 26867658 ~ 26867877 (-) | True | G53761 |
| XM_026939221.2 | mRNA | downstream | 947 | 26687125 ~ 26706755 (-) | True | elovl5 |
| XM_026939345.2 | mRNA | downstream | 39684 | 26640928 ~ 26668018 (-) | False | arfgef3 |
| XM_026939344.2 | mRNA | downstream | 40033 | 26639549 ~ 26667669 (-) | True | arfgef3 |
| XM_026939462.1 | mRNA | downstream | 77824 | 26629250 ~ 26629878 (-) | True | lhb |
| XM_026939066.2 | mRNA | downstream | 86716 | 26529006 ~ 26620986 (-) | True | plpp4 |
| XM_026939535.2 | mRNA | upstream | 122 | 26708519 ~ 26719590 (-) | True | gclc |
| XM_026939068.2 | mRNA | upstream | 12422 | 26720819 ~ 26725438 (-) | True | klhl31 |
| XM_026939386.2 | mRNA | upstream | 250707 | 26959104 ~ 26969207 (-) | True | bmp5 |
| XM_026939531.2 | mRNA | upstream | 267328 | 26975725 ~ 27025885 (-) | False | col21a1 |
| XM_026939530.2 | mRNA | upstream | 267328 | 26975725 ~ 27025885 (-) | True | col21a1 |
| XR_003404274.1 | other | downstream | 797583 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 1971815 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 2055855 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 2055855 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 2667602 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU63465 | other | upstream | 829379 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 1724823 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 2493535 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 2971014 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 3403434 | 30111831 ~ 30122655 (-) | True | G55209 |
