Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU63383 |
| length | 245 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G53665 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 28267721 ~ 28267965 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04974 | Protein digestion and absorption |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU63332 | lncRNA | upstream | 166890 | 28100613 ~ 28100831 (+) | True | G53616 |
| TU63329 | lncRNA | upstream | 200240 | 28064643 ~ 28067481 (+) | True | G53614 |
| TU63021 | lncRNA | upstream | 704781 | 27560172 ~ 27562940 (+) | True | G53331 |
| XR_003404268.2 | lncRNA | upstream | 737255 | 27527865 ~ 27530466 (+) | False | LOC113542161 |
| XR_003404267.2 | lncRNA | upstream | 737255 | 27528106 ~ 27530466 (+) | True | LOC113542161 |
| TU63384 | lncRNA | downstream | 93 | 28268058 ~ 28268341 (+) | True | G53666 |
| TU63394 | lncRNA | downstream | 9893 | 28277858 ~ 28278072 (+) | True | G53676 |
| TU63396 | lncRNA | downstream | 22428 | 28290393 ~ 28290721 (+) | True | G53678 |
| TU63349 | lncRNA | downstream | 31868 | 28299833 ~ 28301492 (+) | False | pde10a |
| TU63400 | lncRNA | downstream | 57677 | 28325642 ~ 28326183 (+) | True | G53682 |
| XM_026939087.2 | mRNA | upstream | 72158 | 28190899 ~ 28195563 (+) | True | tbxtb |
| XM_026939086.2 | mRNA | upstream | 77196 | 28174668 ~ 28190525 (+) | True | si:ch211-130h14.4 |
| XM_026939289.2 | mRNA | upstream | 94200 | 28171929 ~ 28173521 (+) | True | prr18 |
| XM_034302974.1 | mRNA | upstream | 97567 | 28153128 ~ 28170154 (+) | True | sft2d1 |
| XM_026939545.2 | mRNA | upstream | 119273 | 28116760 ~ 28148448 (+) | True | rps6ka2 |
| XM_034302949.1 | mRNA | downstream | 47931 | 28315896 ~ 28317693 (+) | True | LOC113542058 |
| XM_026939322.2 | mRNA | downstream | 50802 | 28318767 ~ 28321820 (+) | True | pla2g12b |
| XM_026939321.2 | mRNA | downstream | 50820 | 28318785 ~ 28321820 (+) | False | pla2g12b |
| XM_026939194.2 | mRNA | downstream | 128227 | 28396192 ~ 28435412 (+) | True | micu1 |
| XM_026939195.2 | mRNA | downstream | 128227 | 28396192 ~ 28435412 (+) | False | micu1 |
| XR_003404257.2 | other | upstream | 1060476 | 27197909 ~ 27207245 (+) | False | znf451 |
| XR_004577886.1 | other | upstream | 1061326 | 27197909 ~ 27206395 (+) | False | znf451 |
| XR_003404258.2 | other | upstream | 1061351 | 27197909 ~ 27206370 (+) | True | znf451 |
| TU63018 | other | upstream | 1275010 | 26985978 ~ 26992711 (+) | True | G53328 |
| TU61306 | other | upstream | 4209834 | 24055241 ~ 24057887 (+) | True | LOC113540163 |
| TU63410 | other | downstream | 179412 | 28447377 ~ 28448311 (+) | True | G53692 |
| trnav-cac | other | downstream | 837479 | 29105444 ~ 29105516 (+) | True | trnav-cac |
| trnav-aac | other | downstream | 839877 | 29107842 ~ 29107914 (+) | True | trnav-aac |
| XR_004577899.1 | other | downstream | 1444293 | 29712258 ~ 29747347 (+) | False | ablim1a |
| TU64923 | other | downstream | 1669583 | 29937548 ~ 29941181 (+) | True | G55091 |
