Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU63967 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G54201 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 28100373 ~ 28100589 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577818.1 | lncRNA | downstream | 72117 | 27978444 ~ 28028256 (-) | False | LOC113542054 |
| XR_003404251.2 | lncRNA | downstream | 72118 | 27992287 ~ 28028255 (-) | True | LOC113542054 |
| TU63459 | lncRNA | downstream | 296923 | 27530576 ~ 27803450 (-) | False | G53729 |
| TU63458 | lncRNA | downstream | 567415 | 27530679 ~ 27532958 (-) | True | G53729 |
| TU63617 | lncRNA | downstream | 732313 | 27367361 ~ 27368060 (-) | True | G53862 |
| TU63970 | lncRNA | upstream | 6126 | 28106715 ~ 28175966 (-) | False | G54204 |
| TU63973 | lncRNA | upstream | 6126 | 28106715 ~ 28107820 (-) | True | G54204 |
| TU63977 | lncRNA | upstream | 6126 | 28106715 ~ 28107820 (-) | False | G54204 |
| TU63993 | lncRNA | upstream | 45749 | 28146338 ~ 28146866 (-) | True | G54219 |
| TU64004 | lncRNA | upstream | 136626 | 28237215 ~ 28237665 (-) | True | G54229 |
| XM_026939399.2 | mRNA | downstream | 917 | 28067773 ~ 28099456 (-) | True | myom2b |
| XM_034303053.1 | mRNA | downstream | 2453 | 28067773 ~ 28097920 (-) | False | myom2b |
| XM_034302635.1 | mRNA | downstream | 502326 | 27562257 ~ 27598047 (-) | False | mcph1 |
| XM_026939280.2 | mRNA | downstream | 502421 | 27562257 ~ 27597952 (-) | False | mcph1 |
| XM_026939283.2 | mRNA | downstream | 502729 | 27562257 ~ 27597644 (-) | False | mcph1 |
| XM_026939320.2 | mRNA | upstream | 214124 | 28314713 ~ 28330532 (-) | True | oit3 |
| XM_026939354.2 | mRNA | upstream | 233036 | 28333625 ~ 28388691 (-) | True | mcu |
| XM_026939481.2 | mRNA | upstream | 336416 | 28437005 ~ 28446340 (-) | True | nolc1 |
| XM_026939250.2 | mRNA | upstream | 368367 | 28468956 ~ 28485759 (-) | True | LOC113542013 |
| XM_034302605.1 | mRNA | upstream | 368367 | 28468956 ~ 28476243 (-) | False | LOC113542013 |
| TU63465 | other | downstream | 559074 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| XR_003404274.1 | other | downstream | 2190254 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 3364486 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 3448526 | 24453119 ~ 24651847 (-) | False | lyst |
| TU64047 | other | upstream | 332631 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 1101343 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 1578822 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 2011242 | 30111831 ~ 30122655 (-) | True | G55209 |
| TU65057 | other | upstream | 2011445 | 30112034 ~ 30122822 (-) | False | G55209 |
