Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU63970 |
| length | 603 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G54204 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 28106715 ~ 28175966 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU63967 | lncRNA | downstream | 6126 | 28100373 ~ 28100589 (-) | True | G54201 |
| XR_004577818.1 | lncRNA | downstream | 78459 | 27978444 ~ 28028256 (-) | False | LOC113542054 |
| XR_003404251.2 | lncRNA | downstream | 78460 | 27992287 ~ 28028255 (-) | True | LOC113542054 |
| TU63459 | lncRNA | downstream | 303265 | 27530576 ~ 27803450 (-) | False | G53729 |
| TU63458 | lncRNA | downstream | 573757 | 27530679 ~ 27532958 (-) | True | G53729 |
| TU64004 | lncRNA | upstream | 61249 | 28237215 ~ 28237665 (-) | True | G54229 |
| TU64054 | lncRNA | upstream | 71704 | 28247670 ~ 28248633 (-) | True | G54276 |
| TU64065 | lncRNA | upstream | 91193 | 28267159 ~ 28267573 (-) | True | G54287 |
| TU64071 | lncRNA | upstream | 99877 | 28275843 ~ 28276054 (-) | True | G54293 |
| TU64073 | lncRNA | upstream | 102526 | 28278492 ~ 28281500 (-) | True | G54295 |
| XM_026939399.2 | mRNA | downstream | 7259 | 28067773 ~ 28099456 (-) | True | myom2b |
| XM_034303053.1 | mRNA | downstream | 8795 | 28067773 ~ 28097920 (-) | False | myom2b |
| XM_026939279.2 | mRNA | downstream | 509072 | 27562258 ~ 27597643 (-) | False | mcph1 |
| XM_026939320.2 | mRNA | upstream | 138747 | 28314713 ~ 28330532 (-) | True | oit3 |
| XM_026939354.2 | mRNA | upstream | 157659 | 28333625 ~ 28388691 (-) | True | mcu |
| XM_026939481.2 | mRNA | upstream | 261039 | 28437005 ~ 28446340 (-) | True | nolc1 |
| XM_026939250.2 | mRNA | upstream | 292990 | 28468956 ~ 28485759 (-) | True | LOC113542013 |
| XM_034302605.1 | mRNA | upstream | 292990 | 28468956 ~ 28476243 (-) | False | LOC113542013 |
| TU63465 | other | downstream | 565416 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| XR_003404274.1 | other | downstream | 2196596 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 3370828 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 3454868 | 24453119 ~ 24651847 (-) | False | lyst |
| TU64047 | other | upstream | 257254 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 1025966 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 1503445 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 1935865 | 30111831 ~ 30122655 (-) | True | G55209 |
| TU65057 | other | upstream | 1936068 | 30112034 ~ 30122822 (-) | False | G55209 |
