Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU64051 |
| length | 434 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G54273 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 28427453 ~ 28429340 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64084 | lncRNA | downstream | 60737 | 28366303 ~ 28366716 (-) | True | G54306 |
| TU64083 | lncRNA | downstream | 65210 | 28356426 ~ 28362243 (-) | True | G54305 |
| TU64042 | lncRNA | downstream | 105639 | 28320533 ~ 28321814 (-) | True | G54265 |
| TU64081 | lncRNA | downstream | 111963 | 28315276 ~ 28315490 (-) | True | G54303 |
| TU64079 | lncRNA | downstream | 113324 | 28312946 ~ 28314129 (-) | True | G54301 |
| TU64099 | lncRNA | upstream | 41551 | 28470891 ~ 28471098 (-) | True | G54320 |
| TU64103 | lncRNA | upstream | 55642 | 28484982 ~ 28485245 (-) | True | G54324 |
| TU64108 | lncRNA | upstream | 67431 | 28496771 ~ 28497888 (-) | True | G54327 |
| XR_004577853.1 | lncRNA | upstream | 573940 | 29003280 ~ 29008803 (-) | True | LOC117596864 |
| XR_004577809.1 | lncRNA | upstream | 647970 | 29077310 ~ 29081966 (-) | True | LOC117596831 |
| XM_026939354.2 | mRNA | downstream | 38762 | 28333625 ~ 28388691 (-) | True | mcu |
| XM_026939320.2 | mRNA | downstream | 96921 | 28314713 ~ 28330532 (-) | True | oit3 |
| XM_026939399.2 | mRNA | downstream | 327997 | 28067773 ~ 28099456 (-) | True | myom2b |
| XM_034303053.1 | mRNA | downstream | 329533 | 28067773 ~ 28097920 (-) | False | myom2b |
| XM_026939285.2 | mRNA | downstream | 829810 | 27568523 ~ 27597643 (-) | False | mcph1 |
| XM_026939481.2 | mRNA | upstream | 7665 | 28437005 ~ 28446340 (-) | True | nolc1 |
| XM_026939250.2 | mRNA | upstream | 39616 | 28468956 ~ 28485759 (-) | True | LOC113542013 |
| XM_034302605.1 | mRNA | upstream | 39616 | 28468956 ~ 28476243 (-) | False | LOC113542013 |
| XM_026939251.2 | mRNA | upstream | 65302 | 28494642 ~ 28496602 (-) | True | LOC113542015 |
| XM_026939117.2 | mRNA | upstream | 70266 | 28499606 ~ 28501398 (-) | True | LOC113541930 |
| TU63465 | other | downstream | 886154 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| XR_003404274.1 | other | downstream | 2517334 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 3691566 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 3775606 | 24453119 ~ 24651847 (-) | False | lyst |
| TU64047 | other | upstream | 3880 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 772592 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 1250071 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 1682491 | 30111831 ~ 30122655 (-) | True | G55209 |
| TU65057 | other | upstream | 1682694 | 30112034 ~ 30122822 (-) | False | G55209 |
