Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU64071 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G54293 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 28275843 ~ 28276054 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04974 | Protein digestion and absorption |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64065 | lncRNA | downstream | 8270 | 28267159 ~ 28267573 (-) | True | G54287 |
| TU64054 | lncRNA | downstream | 27210 | 28247670 ~ 28248633 (-) | True | G54276 |
| TU64004 | lncRNA | downstream | 38178 | 28237215 ~ 28237665 (-) | True | G54229 |
| TU63993 | lncRNA | downstream | 128977 | 28146338 ~ 28146866 (-) | True | G54219 |
| TU63973 | lncRNA | downstream | 168023 | 28106715 ~ 28107820 (-) | True | G54204 |
| TU64073 | lncRNA | upstream | 2438 | 28278492 ~ 28281500 (-) | True | G54295 |
| TU64076 | lncRNA | upstream | 13984 | 28290038 ~ 28290479 (-) | True | G54298 |
| TU64049 | lncRNA | upstream | 19882 | 28295936 ~ 28297769 (-) | True | G54271 |
| TU64048 | lncRNA | upstream | 22866 | 28298920 ~ 28301519 (-) | True | G54270 |
| TU64079 | lncRNA | upstream | 36892 | 28312946 ~ 28314129 (-) | True | G54301 |
| XM_026939399.2 | mRNA | downstream | 176387 | 28067773 ~ 28099456 (-) | True | myom2b |
| XM_034303053.1 | mRNA | downstream | 177923 | 28067773 ~ 28097920 (-) | False | myom2b |
| XM_026939279.2 | mRNA | downstream | 678200 | 27562258 ~ 27597643 (-) | False | mcph1 |
| XM_026939320.2 | mRNA | upstream | 38659 | 28314713 ~ 28330532 (-) | True | oit3 |
| XM_026939354.2 | mRNA | upstream | 57571 | 28333625 ~ 28388691 (-) | True | mcu |
| XM_026939481.2 | mRNA | upstream | 160951 | 28437005 ~ 28446340 (-) | True | nolc1 |
| XM_026939250.2 | mRNA | upstream | 192902 | 28468956 ~ 28485759 (-) | True | LOC113542013 |
| XM_034302605.1 | mRNA | upstream | 192902 | 28468956 ~ 28476243 (-) | False | LOC113542013 |
| TU63465 | other | downstream | 734544 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| XR_003404274.1 | other | downstream | 2365724 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 3539956 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 3623996 | 24453119 ~ 24651847 (-) | False | lyst |
| TU64047 | other | upstream | 157166 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 925878 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 1403357 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 1835777 | 30111831 ~ 30122655 (-) | True | G55209 |
| TU65057 | other | upstream | 1835980 | 30112034 ~ 30122822 (-) | False | G55209 |
