Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU64763 |
| length | 845 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G54958 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 29680526 ~ 29684999 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003404270.2 | lncRNA | upstream | 209708 | 29451896 ~ 29474301 (+) | True | LOC113542173 |
| TU64518 | lncRNA | upstream | 499554 | 29124493 ~ 29184455 (+) | True | G54725 |
| TU64516 | lncRNA | upstream | 540629 | 29118066 ~ 29143380 (+) | True | G54724 |
| TU63419 | lncRNA | upstream | 1187403 | 28493548 ~ 28496606 (+) | True | LOC113542011 |
| TU63425 | lncRNA | upstream | 1200111 | 28483699 ~ 28483898 (+) | True | G53702 |
| TU64777 | lncRNA | downstream | 60164 | 29745163 ~ 29748504 (+) | False | ablim1a |
| XR_003404265.2 | lncRNA | downstream | 180757 | 29865756 ~ 29870830 (+) | True | LOC113542139 |
| TU64967 | lncRNA | downstream | 454276 | 30139275 ~ 30139776 (+) | True | G55129 |
| TU64966 | lncRNA | downstream | 455225 | 30140224 ~ 30145109 (+) | True | G55128 |
| TU64971 | lncRNA | downstream | 463102 | 30148101 ~ 30157041 (+) | True | G55132 |
| XM_026939342.2 | mRNA | upstream | 322900 | 29163415 ~ 29361109 (+) | False | LOC113542066 |
| XM_026939187.2 | mRNA | downstream | 11278 | 29696277 ~ 29707979 (+) | True | fam160b1 |
| XM_034303133.1 | mRNA | downstream | 27338 | 29712337 ~ 29747481 (+) | False | ablim1a |
| XM_026939431.2 | mRNA | downstream | 27339 | 29712338 ~ 29747481 (+) | False | ablim1a |
| XM_026939428.2 | mRNA | downstream | 27339 | 29712338 ~ 29747481 (+) | False | ablim1a |
| XM_026939426.2 | mRNA | downstream | 27340 | 29712339 ~ 29748505 (+) | True | ablim1a |
| trnav-aac | other | upstream | 576095 | 29107842 ~ 29107914 (+) | True | trnav-aac |
| trnav-cac | other | upstream | 578493 | 29105444 ~ 29105516 (+) | True | trnav-cac |
| TU63410 | other | upstream | 1235698 | 28447377 ~ 28448311 (+) | True | G53692 |
| XR_004577886.1 | other | upstream | 2477614 | 27197909 ~ 27206395 (+) | False | znf451 |
| XR_004577899.1 | other | downstream | 27259 | 29712258 ~ 29747347 (+) | False | ablim1a |
| TU64923 | other | downstream | 252549 | 29937548 ~ 29941181 (+) | True | G55091 |
| TU65142 | other | downstream | 669323 | 30354322 ~ 30358454 (+) | False | mgst3b |
| TU65162 | other | downstream | 794933 | 30479932 ~ 30486287 (+) | False | LOC113542119 |
| TU66180 | other | downstream | 2100786 | 31785785 ~ 31796326 (+) | True | G56222 |
