Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303117.1 |
| length | 1241 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | rsrp1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 30340399 ~ 30344538 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65128 | lncRNA | downstream | 549 | 30339477 ~ 30339850 (-) | True | G55270 |
| TU65051 | lncRNA | downstream | 140242 | 30198325 ~ 30200157 (-) | False | runx3 |
| TU65077 | lncRNA | downstream | 177429 | 30162751 ~ 30162970 (-) | True | G55220 |
| TU65018 | lncRNA | downstream | 290699 | 30048430 ~ 30049700 (-) | False | cdh23 |
| TU64883 | lncRNA | downstream | 463639 | 29875406 ~ 29876760 (-) | False | LOC113542120 |
| TU65226 | lncRNA | upstream | 3586 | 30347170 ~ 30387537 (-) | True | G55349 |
| TU65232 | lncRNA | upstream | 11987 | 30355571 ~ 30414469 (-) | True | G55351 |
| TU65230 | lncRNA | upstream | 14370 | 30357954 ~ 30386396 (-) | False | G55351 |
| XR_004577788.1 | lncRNA | upstream | 53828 | 30397412 ~ 30401396 (-) | True | LOC113541972 |
| TU65284 | lncRNA | upstream | 129020 | 30472604 ~ 30477610 (-) | True | G55400 |
| XM_026939142.2 | mRNA | downstream | 86943 | 30200153 ~ 30253456 (-) | True | runx3 |
| XM_026939415.2 | mRNA | downstream | 165279 | 30163347 ~ 30175120 (-) | True | chp1 |
| XM_034302618.1 | mRNA | downstream | 179175 | 30155087 ~ 30161224 (-) | False | khdrbs1a |
| XM_026939471.2 | mRNA | downstream | 191475 | 30140946 ~ 30148924 (-) | True | LOC113542130 |
| XM_026939035.2 | mRNA | downstream | 231202 | 29879295 ~ 30109197 (-) | False | cdh23 |
| XM_034303167.1 | mRNA | upstream | 1537 | 30345121 ~ 30352294 (-) | False | eif2ak2 |
| XM_034303168.1 | mRNA | upstream | 1537 | 30345121 ~ 30352293 (-) | False | eif2ak2 |
| XM_034303166.1 | mRNA | upstream | 1537 | 30345121 ~ 30352293 (-) | False | eif2ak2 |
| XM_026939516.2 | mRNA | upstream | 1537 | 30345121 ~ 30352293 (-) | True | eif2ak2 |
| XM_026939517.2 | mRNA | upstream | 1537 | 30345121 ~ 30352283 (-) | False | eif2ak2 |
| XR_004577811.1 | other | downstream | 179176 | 30152908 ~ 30161223 (-) | True | khdrbs1a |
| XR_004577810.1 | other | downstream | 179176 | 30153487 ~ 30161223 (-) | False | khdrbs1a |
| TU65057 | other | downstream | 217577 | 30112034 ~ 30122822 (-) | False | G55209 |
| TU65059 | other | downstream | 217744 | 30111831 ~ 30122655 (-) | True | G55209 |
| trnag-gcc_2 | other | upstream | 411822 | 30755406 ~ 30755476 (-) | True | trnag-gcc_2 |
| trnag-gcc_3 | other | upstream | 508353 | 30851937 ~ 30852007 (-) | True | trnag-gcc_3 |
| trnag-gcc_4 | other | upstream | 516852 | 30860436 ~ 30860506 (-) | True | trnag-gcc_4 |
| XR_004577789.1 | other | upstream | 1202776 | 31546360 ~ 31548633 (-) | False | LOC113541990 |
| TU66090 | other | upstream | 1219971 | 31563555 ~ 31600685 (-) | True | G56150 |
