Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU66291 |
| length | 775 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 4 |
| gene id | G56303 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 31837182 ~ 31838235 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66256 | lncRNA | downstream | 10048 | 31817253 ~ 31827134 (-) | True | G56271 |
| TU66264 | lncRNA | downstream | 107070 | 31728773 ~ 31730112 (-) | True | G56279 |
| TU66258 | lncRNA | downstream | 149710 | 31687263 ~ 31687472 (-) | False | fndc5a |
| XR_004577870.1 | lncRNA | downstream | 161231 | 31657051 ~ 31675951 (-) | False | LOC117596876 |
| TU66315 | lncRNA | upstream | 6802 | 31845037 ~ 31846195 (-) | True | G56315 |
| TU66299 | lncRNA | upstream | 21572 | 31859807 ~ 31933590 (-) | False | G56305 |
| TU66300 | lncRNA | upstream | 49446 | 31887681 ~ 31933590 (-) | False | G56305 |
| TU66294 | lncRNA | upstream | 91775 | 31930010 ~ 31933590 (-) | True | G56305 |
| TU66293 | lncRNA | upstream | 93701 | 31931936 ~ 31933590 (-) | False | G56305 |
| XM_034302651.1 | mRNA | downstream | 6250 | 31678383 ~ 31830932 (-) | False | fndc5a |
| XM_034302648.1 | mRNA | downstream | 6254 | 31678383 ~ 31830928 (-) | False | fndc5a |
| XM_034302647.1 | mRNA | downstream | 6254 | 31678383 ~ 31830928 (-) | False | fndc5a |
| XM_034302646.1 | mRNA | downstream | 6254 | 31678383 ~ 31830928 (-) | False | fndc5a |
| XM_034302645.1 | mRNA | downstream | 6254 | 31678383 ~ 31830928 (-) | True | fndc5a |
| XM_034302701.1 | mRNA | upstream | 158274 | 31996509 ~ 32006650 (-) | True | gphb5 |
| XM_034302615.1 | mRNA | upstream | 293212 | 32131447 ~ 32188846 (-) | False | esr2b |
| XM_034302614.1 | mRNA | upstream | 293212 | 32131447 ~ 32188846 (-) | False | esr2b |
| XM_034302616.1 | mRNA | upstream | 293212 | 32131447 ~ 32188844 (-) | False | esr2b |
| XM_034302613.1 | mRNA | upstream | 294246 | 32132481 ~ 32188847 (-) | False | esr2b |
| TU66257 | other | downstream | 7698 | 31827814 ~ 31829484 (-) | True | G56272 |
| TU66090 | other | downstream | 236497 | 31563555 ~ 31600685 (-) | True | G56150 |
| XR_004577789.1 | other | downstream | 288549 | 31546360 ~ 31548633 (-) | False | LOC113541990 |
| trnag-gcc_4 | other | downstream | 976676 | 30860436 ~ 30860506 (-) | True | trnag-gcc_4 |
| trnag-gcc_3 | other | downstream | 985175 | 30851937 ~ 30852007 (-) | True | trnag-gcc_3 |
| XR_004577843.1 | other | upstream | 401366 | 32239601 ~ 32289607 (-) | False | brf1a |
| TU66783 | other | upstream | 512566 | 32350801 ~ 32354482 (-) | False | tmem39b |
| XR_004577855.1 | other | upstream | 536101 | 32374336 ~ 32389144 (-) | False | ndufaf1 |
| XR_004577854.1 | other | upstream | 536111 | 32374346 ~ 32389144 (-) | False | ndufaf1 |
| TU66930 | other | upstream | 815601 | 32653836 ~ 32661562 (-) | True | slc66a3 |
