Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU66738 |
| length | 322 |
| lncRNA type | intronic |
| GC content | 0.49 |
| exon number | 3 |
| gene id | G56675 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 32207489 ~ 32208007 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66675 | lncRNA | downstream | 134991 | 32070763 ~ 32072498 (-) | True | G56614 |
| TU66676 | lncRNA | downstream | 134991 | 32070763 ~ 32072498 (-) | False | G56614 |
| TU66299 | lncRNA | downstream | 273899 | 31859807 ~ 31933590 (-) | False | G56305 |
| TU66300 | lncRNA | downstream | 273899 | 31887681 ~ 31933590 (-) | False | G56305 |
| TU66294 | lncRNA | downstream | 273899 | 31930010 ~ 31933590 (-) | True | G56305 |
| TU66757 | lncRNA | upstream | 35916 | 32243923 ~ 32244290 (-) | True | G56693 |
| TU66733 | lncRNA | upstream | 92299 | 32300306 ~ 32309955 (-) | True | G56670 |
| TU66724 | lncRNA | upstream | 173120 | 32381127 ~ 32381831 (-) | True | G56661 |
| TU66731 | lncRNA | upstream | 191908 | 32399915 ~ 32400310 (-) | True | G56668 |
| TU66735 | lncRNA | upstream | 206902 | 32414909 ~ 32415460 (-) | True | G56672 |
| XM_034302613.1 | mRNA | downstream | 18642 | 32132481 ~ 32188847 (-) | False | esr2b |
| XM_034302615.1 | mRNA | downstream | 18643 | 32131447 ~ 32188846 (-) | False | esr2b |
| XM_034302614.1 | mRNA | downstream | 18643 | 32131447 ~ 32188846 (-) | False | esr2b |
| XM_026939147.2 | mRNA | downstream | 18644 | 32132481 ~ 32188845 (-) | False | esr2b |
| XM_026939148.2 | mRNA | downstream | 18644 | 32132481 ~ 32188845 (-) | True | esr2b |
| XM_034302823.1 | mRNA | upstream | 36626 | 32244633 ~ 32289607 (-) | True | brf1a |
| XM_034302946.1 | mRNA | upstream | 107451 | 32315458 ~ 32331216 (-) | False | dcdc2b |
| XM_034302945.1 | mRNA | upstream | 107451 | 32315458 ~ 32331216 (-) | True | dcdc2b |
| XM_034302944.1 | mRNA | upstream | 107451 | 32315458 ~ 32330739 (-) | False | dcdc2b |
| XM_026939422.2 | mRNA | upstream | 123386 | 32331393 ~ 32336477 (-) | True | iqcc |
| TU66291 | other | downstream | 369254 | 31837182 ~ 31838235 (-) | True | G56303 |
| TU66257 | other | downstream | 378005 | 31827814 ~ 31829484 (-) | True | G56272 |
| TU66090 | other | downstream | 606804 | 31563555 ~ 31600685 (-) | True | G56150 |
| XR_004577789.1 | other | downstream | 658856 | 31546360 ~ 31548633 (-) | False | LOC113541990 |
| trnag-gcc_4 | other | downstream | 1346983 | 30860436 ~ 30860506 (-) | True | trnag-gcc_4 |
| XR_004577843.1 | other | upstream | 31594 | 32239601 ~ 32289607 (-) | False | brf1a |
| TU66783 | other | upstream | 142794 | 32350801 ~ 32354482 (-) | False | tmem39b |
| XR_004577855.1 | other | upstream | 166329 | 32374336 ~ 32389144 (-) | False | ndufaf1 |
| XR_004577854.1 | other | upstream | 166339 | 32374346 ~ 32389144 (-) | False | ndufaf1 |
| TU66930 | other | upstream | 445829 | 32653836 ~ 32661562 (-) | True | slc66a3 |
