Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU67378 |
| length | 345 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | G57215 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 33067534 ~ 33068685 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU67331 | lncRNA | downstream | 267062 | 32799111 ~ 32800472 (-) | True | G57169 |
| TU67281 | lncRNA | downstream | 291937 | 32729884 ~ 32775597 (-) | True | G57126 |
| TU66958 | lncRNA | downstream | 353601 | 32713729 ~ 32713933 (-) | True | G56860 |
| TU66932 | lncRNA | downstream | 403191 | 32663881 ~ 32664343 (-) | True | G56834 |
| TU66925 | lncRNA | downstream | 419598 | 32644692 ~ 32647936 (-) | True | G56827 |
| TU67441 | lncRNA | upstream | 165981 | 33234666 ~ 33235712 (-) | True | G57267 |
| TU67449 | lncRNA | upstream | 188544 | 33257229 ~ 33257792 (-) | True | G57275 |
| TU67469 | lncRNA | upstream | 228134 | 33296819 ~ 33298313 (-) | True | G57290 |
| TU67471 | lncRNA | upstream | 234885 | 33303570 ~ 33305518 (-) | True | G57292 |
| TU67475 | lncRNA | upstream | 257395 | 33326080 ~ 33360691 (-) | True | G57294 |
| XM_026939056.2 | mRNA | downstream | 199179 | 32865245 ~ 32868355 (-) | True | rdh14a |
| XM_026939072.2 | mRNA | downstream | 303190 | 32759671 ~ 32764344 (-) | False | mtres1 |
| XM_026939073.2 | mRNA | downstream | 303194 | 32759671 ~ 32764340 (-) | False | mtres1 |
| XM_026939071.2 | mRNA | downstream | 303230 | 32759671 ~ 32764304 (-) | True | mtres1 |
| XM_034303027.1 | mRNA | downstream | 357423 | 32670089 ~ 32710111 (-) | False | sobpa |
| XM_026939055.2 | mRNA | upstream | 26971 | 33095656 ~ 33104243 (-) | True | osr1 |
| XM_034302726.1 | mRNA | upstream | 26971 | 33095656 ~ 33102293 (-) | False | osr1 |
| XM_026939447.2 | mRNA | upstream | 218116 | 33286801 ~ 33293343 (-) | True | LOC113542112 |
| XM_026939217.2 | mRNA | upstream | 237627 | 33306312 ~ 33321663 (-) | True | hif1aa |
| XM_034301269.1 | mRNA | upstream | 260320 | 33329005 ~ 33336795 (-) | True | prkcha |
| TU67278 | other | downstream | 338793 | 32715827 ~ 32728741 (-) | True | G57124 |
| TU66930 | other | downstream | 405972 | 32653836 ~ 32661562 (-) | True | slc66a3 |
| XR_004577855.1 | other | downstream | 678390 | 32374336 ~ 32389144 (-) | False | ndufaf1 |
| XR_004577854.1 | other | downstream | 678390 | 32374346 ~ 32389144 (-) | False | ndufaf1 |
| TU66783 | other | downstream | 713052 | 32350801 ~ 32354482 (-) | False | tmem39b |
| TU67383 | other | upstream | 271537 | 33340222 ~ 33344809 (-) | False | slc38a6 |
| TU67416 | other | upstream | 354984 | 33423669 ~ 33429769 (-) | False | lrrc9 |
| TU67506 | other | upstream | 386537 | 33455222 ~ 33462342 (-) | True | G57322 |
| trnag-gcc_5 | other | upstream | 461242 | 33529927 ~ 33529997 (-) | True | trnag-gcc_5 |
| TU67534 | other | upstream | 496851 | 33565536 ~ 33570218 (-) | False | LOC113542143 |
