Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU67500 |
| length | 631 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G57317 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 33421824 ~ 33422474 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU67395 | lncRNA | downstream | 10371 | 33410548 ~ 33411453 (-) | True | G57223 |
| TU67483 | lncRNA | downstream | 11053 | 33365057 ~ 33410771 (-) | True | G57302 |
| TU67405 | lncRNA | downstream | 15698 | 33370775 ~ 33406126 (-) | True | G57232 |
| TU67396 | lncRNA | downstream | 46323 | 33369860 ~ 33375501 (-) | True | G57224 |
| TU67481 | lncRNA | downstream | 57277 | 33363604 ~ 33364547 (-) | True | G57300 |
| TU67389 | lncRNA | upstream | 43225 | 33465699 ~ 33467307 (-) | True | G57220 |
| TU67393 | lncRNA | upstream | 57874 | 33480348 ~ 33520877 (-) | False | mycla |
| TU67394 | lncRNA | upstream | 97152 | 33519626 ~ 33520877 (-) | False | mycla |
| TU67519 | lncRNA | upstream | 113004 | 33535478 ~ 33535975 (-) | True | G57335 |
| TU67540 | lncRNA | upstream | 148936 | 33571410 ~ 33572419 (-) | True | G57354 |
| XM_026939485.2 | mRNA | downstream | 18100 | 33389493 ~ 33403724 (-) | True | six4a |
| XM_034301294.1 | mRNA | downstream | 34005 | 33385114 ~ 33387819 (-) | False | six1a |
| XM_026939310.2 | mRNA | downstream | 34005 | 33385114 ~ 33387819 (-) | True | six1a |
| XM_026939307.2 | mRNA | downstream | 59959 | 33357030 ~ 33361865 (-) | True | dhrs7 |
| XM_034302705.1 | mRNA | downstream | 76988 | 33337403 ~ 33344836 (-) | True | slc38a6 |
| XM_034302706.1 | mRNA | upstream | 1190 | 33423664 ~ 33442815 (-) | True | lrrc9 |
| XM_034302075.1 | mRNA | upstream | 45549 | 33468023 ~ 33484082 (-) | False | tdrd9 |
| XM_034302071.1 | mRNA | upstream | 45549 | 33468023 ~ 33484082 (-) | True | tdrd9 |
| XM_034302762.1 | mRNA | upstream | 62539 | 33485013 ~ 33505325 (-) | False | kif15 |
| XM_034302761.1 | mRNA | upstream | 62539 | 33485013 ~ 33505325 (-) | True | kif15 |
| TU67383 | other | downstream | 77015 | 33340222 ~ 33344809 (-) | False | slc38a6 |
| TU67373 | other | downstream | 322252 | 33019278 ~ 33099572 (-) | True | G57210 |
| TU67278 | other | downstream | 693083 | 32715827 ~ 32728741 (-) | True | G57124 |
| TU66930 | other | downstream | 760262 | 32653836 ~ 32661562 (-) | True | slc66a3 |
| XR_004577854.1 | other | downstream | 1032680 | 32374346 ~ 32389144 (-) | False | ndufaf1 |
| TU67416 | other | upstream | 1195 | 33423669 ~ 33429769 (-) | False | lrrc9 |
| TU67506 | other | upstream | 32748 | 33455222 ~ 33462342 (-) | True | G57322 |
| trnag-gcc_5 | other | upstream | 107453 | 33529927 ~ 33529997 (-) | True | trnag-gcc_5 |
| TU67534 | other | upstream | 143062 | 33565536 ~ 33570218 (-) | False | LOC113542143 |
