Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026932353.2 |
| length | 1152 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | paip2b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 8441785 ~ 8445916 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577904.1 | lncRNA | upstream | 13144 | 8425810 ~ 8428641 (+) | True | LOC117596914 |
| XR_004577895.1 | lncRNA | upstream | 169880 | 8270410 ~ 8271905 (+) | True | LOC117596904 |
| XR_004577894.1 | lncRNA | upstream | 169880 | 8270410 ~ 8271905 (+) | False | LOC117596904 |
| TU50295 | lncRNA | upstream | 217960 | 8219916 ~ 8223825 (+) | True | G42548 |
| TU50244 | lncRNA | upstream | 244543 | 8196872 ~ 8197242 (+) | True | G42498 |
| TU50449 | lncRNA | downstream | 23713 | 8469629 ~ 8469881 (+) | True | trnak-cuu |
| TU50484 | lncRNA | downstream | 105582 | 8551498 ~ 8551884 (+) | True | G42717 |
| TU50485 | lncRNA | downstream | 106795 | 8552711 ~ 8553382 (+) | True | G42718 |
| TU50481 | lncRNA | downstream | 165685 | 8611601 ~ 8650995 (+) | True | G42714 |
| TU50545 | lncRNA | downstream | 212309 | 8658225 ~ 8659561 (+) | True | G42763 |
| XM_026945018.2 | mRNA | upstream | 361495 | 8069821 ~ 8080290 (+) | True | lrpap1 |
| XM_026941926.2 | mRNA | upstream | 670447 | 7757610 ~ 7771338 (+) | False | cpz |
| XM_026941917.2 | mRNA | upstream | 670447 | 7757611 ~ 7771338 (+) | True | cpz |
| XM_026943765.2 | mRNA | upstream | 686626 | 7749636 ~ 7755159 (+) | True | gpr78a |
| XM_034301226.1 | mRNA | upstream | 705876 | 7716040 ~ 7735909 (+) | True | LOC117596357 |
| XM_026934625.2 | mRNA | downstream | 2741 | 8448657 ~ 8452951 (+) | True | dok1a |
| XM_026934984.2 | mRNA | downstream | 10812 | 8456728 ~ 8461540 (+) | False | si:ch211-89o9.6 |
| XM_026934975.2 | mRNA | downstream | 10815 | 8456731 ~ 8464439 (+) | True | si:ch211-89o9.6 |
| XM_026935251.2 | mRNA | downstream | 66061 | 8511977 ~ 8517230 (+) | True | tmem176 |
| XM_026935228.2 | mRNA | downstream | 84539 | 8530455 ~ 8534035 (+) | True | LOC113539481 |
| XR_003404394.2 | other | upstream | 775752 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU49753 | other | upstream | 1220762 | 7203950 ~ 7221023 (+) | True | G42075 |
| XR_003404319.2 | other | upstream | 3085088 | 5263582 ~ 5356697 (+) | False | znf827 |
| TU48562 | other | upstream | 3100035 | 5318534 ~ 5341750 (+) | True | G41047 |
| TU47789 | other | upstream | 4607174 | 3831949 ~ 3834611 (+) | False | LOC113545357 |
| TU50445 | other | downstream | 19831 | 8465747 ~ 8466312 (+) | True | G42685 |
| trnak-cuu | other | downstream | 23708 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| TU52056 | other | downstream | 2106343 | 10552259 ~ 10558295 (+) | True | sprn |
| XR_004577889.1 | other | downstream | 2148658 | 10594574 ~ 10608704 (+) | False | LOC113543929 |
| XR_004577793.1 | other | downstream | 2653677 | 11099593 ~ 11171114 (+) | False | dntt |
