Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026933092.2 |
| length | 998 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 7 |
| gene id | comtd1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 18683496 ~ 18686611 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008171 | O-methyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU57465 | lncRNA | upstream | 221300 | 18460673 ~ 18462196 (+) | True | G48571 |
| TU57387 | lncRNA | upstream | 460949 | 18222068 ~ 18222547 (+) | True | G48494 |
| TU57379 | lncRNA | upstream | 461517 | 18221308 ~ 18221979 (+) | False | dlg5a |
| TU57367 | lncRNA | upstream | 508997 | 18174300 ~ 18174499 (+) | True | G48478 |
| XR_003404227.2 | lncRNA | upstream | 598697 | 18081617 ~ 18084799 (+) | False | LOC113541886 |
| TU57372 | lncRNA | downstream | 14245 | 18700856 ~ 18701906 (+) | False | G48482 |
| TU57584 | lncRNA | downstream | 21421 | 18708032 ~ 18711295 (+) | False | G48690 |
| TU57585 | lncRNA | downstream | 21421 | 18708032 ~ 18710371 (+) | True | G48690 |
| TU57821 | lncRNA | downstream | 224875 | 18911486 ~ 18912177 (+) | False | zgc:110319 |
| TU57833 | lncRNA | downstream | 280795 | 18967406 ~ 18967777 (+) | True | G48908 |
| XM_026944967.2 | mRNA | upstream | 61201 | 18619229 ~ 18622295 (+) | True | znf503 |
| XM_034303143.1 | mRNA | upstream | 311007 | 18227260 ~ 18372489 (+) | True | kcnma1a |
| XM_026932946.2 | mRNA | upstream | 461446 | 18176741 ~ 18222050 (+) | True | dlg5a |
| XM_026933079.2 | mRNA | downstream | 1866 | 18688477 ~ 18691778 (+) | True | ifit8 |
| XM_026934506.2 | mRNA | downstream | 9109 | 18695720 ~ 18699679 (+) | True | LOC113538988 |
| XM_026935928.2 | mRNA | downstream | 166091 | 18852702 ~ 18883431 (+) | False | tet1 |
| XM_026935913.2 | mRNA | downstream | 168230 | 18854841 ~ 18883431 (+) | True | tet1 |
| XM_034302756.1 | mRNA | downstream | 168230 | 18854841 ~ 18883431 (+) | False | tet1 |
| TU55884 | other | upstream | 2446848 | 16234535 ~ 16236648 (+) | False | lrrc18a |
| XR_003404341.2 | other | upstream | 2610429 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
| TU55689 | other | upstream | 2611576 | 16070759 ~ 16071920 (+) | False | cxcl18a.1 |
| TU55629 | other | upstream | 2886292 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_004577898.1 | other | upstream | 4316050 | 14361367 ~ 14367446 (+) | False | cgas |
| XR_003403773.2 | other | downstream | 654739 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| XR_004577568.1 | other | downstream | 654739 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_004577569.1 | other | downstream | 654739 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403774.2 | other | downstream | 654739 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403775.2 | other | downstream | 654739 | 19341350 ~ 19356098 (+) | False | sfxn5a |
