Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026933348.2 |
| length | 1109 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 6 |
| gene id | rgs17 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 9316791 ~ 9338616 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0043547 | positive regulation of GTPase activity | biological_process |
| GO:0038032 | termination of G protein-coupled receptor signaling pathway | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005096 | GTPase activator activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50999 | lncRNA | upstream | 92198 | 9224363 ~ 9224593 (+) | True | G43137 |
| TU50649 | lncRNA | upstream | 301750 | 9012486 ~ 9015041 (+) | True | G42848 |
| TU50628 | lncRNA | upstream | 362765 | 8953522 ~ 8954026 (+) | True | G42833 |
| TU50585 | lncRNA | upstream | 445865 | 8812836 ~ 8870926 (+) | True | G42792 |
| TU50573 | lncRNA | upstream | 545728 | 8769324 ~ 8771063 (+) | True | G42783 |
| TU51058 | lncRNA | downstream | 5439 | 9344055 ~ 9345181 (+) | False | G43186 |
| TU51055 | lncRNA | downstream | 6814 | 9345430 ~ 9347236 (+) | True | G43186 |
| TU51239 | lncRNA | downstream | 150143 | 9488759 ~ 9488959 (+) | True | G43330 |
| TU51246 | lncRNA | downstream | 156361 | 9494977 ~ 9495210 (+) | True | G43337 |
| TU51269 | lncRNA | downstream | 188245 | 9526861 ~ 9527159 (+) | True | G43360 |
| XM_026938999.2 | mRNA | upstream | 105498 | 9152330 ~ 9211293 (+) | False | phactr2 |
| XM_026939032.2 | mRNA | upstream | 105498 | 9152335 ~ 9211293 (+) | False | phactr2 |
| XM_026939024.2 | mRNA | upstream | 105498 | 9165830 ~ 9211293 (+) | False | phactr2 |
| XM_026939016.2 | mRNA | upstream | 105498 | 9177221 ~ 9211293 (+) | False | phactr2 |
| XM_026939006.2 | mRNA | upstream | 105498 | 9185084 ~ 9211293 (+) | True | phactr2 |
| XM_026942835.2 | mRNA | downstream | 44022 | 9382638 ~ 9408518 (+) | True | map3k21 |
| XM_026945162.2 | mRNA | downstream | 82450 | 9421066 ~ 9487539 (+) | True | prim2 |
| XM_026938626.2 | mRNA | downstream | 305193 | 9643809 ~ 9666593 (+) | True | si:dkey-103j14.5 |
| XM_026944483.2 | mRNA | downstream | 401174 | 9739790 ~ 9745528 (+) | True | kifbp |
| XM_034302989.1 | mRNA | downstream | 425017 | 9763633 ~ 9772357 (+) | True | vps26a |
| trnak-cuu | other | upstream | 847095 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| TU50445 | other | upstream | 850479 | 8465747 ~ 8466312 (+) | True | G42685 |
| XR_003404394.2 | other | upstream | 1650758 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU49753 | other | upstream | 2095768 | 7203950 ~ 7221023 (+) | True | G42075 |
| TU48562 | other | upstream | 3975041 | 5318534 ~ 5341750 (+) | True | G41047 |
| TU52056 | other | downstream | 1213643 | 10552259 ~ 10558295 (+) | True | sprn |
| XR_004577889.1 | other | downstream | 1255958 | 10594574 ~ 10608704 (+) | False | LOC113543929 |
| XR_004577793.1 | other | downstream | 1760977 | 11099593 ~ 11171114 (+) | False | dntt |
| trnag-ccc | other | downstream | 2252719 | 11591335 ~ 11591405 (+) | True | trnag-ccc |
| XR_003404598.2 | other | downstream | 2344248 | 11682864 ~ 11726772 (+) | False | LOC113545306 |
