Item | Value |
---|---|
RNA id | XM_026935173.2 |
length | 1355 |
RNA type | mRNA |
GC content | 0.42 |
exon number | 11 |
gene id | zgc:165520 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047597.1 |
NCBI id | CM018543.1 |
chromosome length | 33776708 |
location | 8605089 ~ 8610844 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | description |
---|---|
K08486 | STX1B_2_3; syntaxin 1B/2/3 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU50741 | lncRNA | downstream | 53734 | 8551130 ~ 8551355 (-) | True | G42914 |
TU50703 | lncRNA | downstream | 111785 | 8493068 ~ 8493304 (-) | True | G42894 |
TU50701 | lncRNA | downstream | 119079 | 8484155 ~ 8486010 (-) | False | LOC113539440 |
TU50426 | lncRNA | downstream | 224374 | 8380340 ~ 8380715 (-) | True | G42671 |
TU50420 | lncRNA | downstream | 305645 | 8299180 ~ 8299444 (-) | True | G42665 |
TU50814 | lncRNA | upstream | 143307 | 8754151 ~ 8754896 (-) | True | G42970 |
TU50831 | lncRNA | upstream | 157144 | 8767988 ~ 8769186 (-) | True | G42987 |
TU50844 | lncRNA | upstream | 246414 | 8857258 ~ 8861508 (-) | True | G42994 |
TU50882 | lncRNA | upstream | 405358 | 9016202 ~ 9017636 (-) | True | G43029 |
TU51072 | lncRNA | upstream | 706584 | 9317428 ~ 9341922 (-) | True | G43198 |
XM_026934742.2 | mRNA | downstream | 611 | 8582190 ~ 8604478 (-) | False | kdm2aa |
XM_026934750.2 | mRNA | downstream | 1344 | 8582190 ~ 8603745 (-) | True | kdm2aa |
XM_026934757.2 | mRNA | downstream | 3332 | 8582190 ~ 8601757 (-) | False | kdm2aa |
XM_026934724.2 | mRNA | downstream | 3332 | 8582190 ~ 8601757 (-) | False | kdm2aa |
XM_026934765.2 | mRNA | downstream | 3399 | 8582190 ~ 8601690 (-) | False | kdm2aa |
XM_026935239.2 | mRNA | upstream | 1217 | 8612061 ~ 8616849 (-) | True | ndufs8a |
XM_026935196.2 | mRNA | upstream | 13722 | 8624566 ~ 8626389 (-) | True | tmem187 |
XM_026935129.2 | mRNA | upstream | 27573 | 8638417 ~ 8646104 (-) | True | p2rx3b |
XM_034303008.1 | mRNA | upstream | 43318 | 8654162 ~ 8675424 (-) | False | ssrp1b |
XM_034303006.1 | mRNA | upstream | 43318 | 8654162 ~ 8675424 (-) | True | ssrp1b |
trnae-cuc_7 | other | downstream | 134660 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
trnam-cau_4 | other | downstream | 135032 | 8469986 ~ 8470057 (-) | True | trnam-cau_4 |
trnam-cau_3 | other | downstream | 135947 | 8469071 ~ 8469142 (-) | True | trnam-cau_3 |
trnam-cau_2 | other | downstream | 136982 | 8468036 ~ 8468107 (-) | True | trnam-cau_2 |
trnam-cau_1 | other | downstream | 138034 | 8466984 ~ 8467055 (-) | True | trnam-cau_1 |
XR_003403913.2 | other | upstream | 145025 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
TU50809 | other | upstream | 190399 | 8801243 ~ 8853794 (-) | True | G42967 |
TU50810 | other | upstream | 238265 | 8849109 ~ 8853794 (-) | False | G42967 |
TU51003 | other | upstream | 614037 | 9224881 ~ 9228884 (-) | True | sf3b5 |
trnag-gcc_1 | other | upstream | 3097770 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |