Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026935251.2 |
| length | 910 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | tmem176 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 8511977 ~ 8517230 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50449 | lncRNA | upstream | 42096 | 8469629 ~ 8469881 (+) | True | trnak-cuu |
| XR_004577904.1 | lncRNA | upstream | 83336 | 8425810 ~ 8428641 (+) | True | LOC117596914 |
| XR_004577895.1 | lncRNA | upstream | 240072 | 8270410 ~ 8271905 (+) | True | LOC117596904 |
| XR_004577894.1 | lncRNA | upstream | 240072 | 8270410 ~ 8271905 (+) | False | LOC117596904 |
| TU50295 | lncRNA | upstream | 288152 | 8219916 ~ 8223825 (+) | True | G42548 |
| TU50484 | lncRNA | downstream | 34268 | 8551498 ~ 8551884 (+) | True | G42717 |
| TU50485 | lncRNA | downstream | 35481 | 8552711 ~ 8553382 (+) | True | G42718 |
| TU50481 | lncRNA | downstream | 94371 | 8611601 ~ 8650995 (+) | True | G42714 |
| TU50545 | lncRNA | downstream | 140995 | 8658225 ~ 8659561 (+) | True | G42763 |
| TU50572 | lncRNA | downstream | 247381 | 8764611 ~ 8767603 (+) | True | G42782 |
| XM_026934975.2 | mRNA | upstream | 47538 | 8456731 ~ 8464439 (+) | True | si:ch211-89o9.6 |
| XM_026934984.2 | mRNA | upstream | 50437 | 8456728 ~ 8461540 (+) | False | si:ch211-89o9.6 |
| XM_026934625.2 | mRNA | upstream | 59026 | 8448657 ~ 8452951 (+) | True | dok1a |
| XM_026932353.2 | mRNA | upstream | 66061 | 8441785 ~ 8445916 (+) | True | paip2b |
| XM_026945018.2 | mRNA | upstream | 431687 | 8069821 ~ 8080290 (+) | True | lrpap1 |
| XM_026935228.2 | mRNA | downstream | 13225 | 8530455 ~ 8534035 (+) | True | LOC113539481 |
| XM_026935055.2 | mRNA | downstream | 19609 | 8536839 ~ 8546738 (+) | True | LOC113539337 |
| XM_026935045.2 | mRNA | downstream | 19609 | 8536839 ~ 8546738 (+) | False | LOC113539337 |
| XM_034301424.1 | mRNA | downstream | 101495 | 8618725 ~ 8623407 (+) | True | si:dkey-9i23.8 |
| XM_026934966.2 | mRNA | downstream | 109673 | 8626903 ~ 8634451 (+) | True | si:dkey-9i23.6 |
| trnak-cuu | other | upstream | 42281 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| TU50445 | other | upstream | 45665 | 8465747 ~ 8466312 (+) | True | G42685 |
| XR_003404394.2 | other | upstream | 845944 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU49753 | other | upstream | 1290954 | 7203950 ~ 7221023 (+) | True | G42075 |
| XR_003404319.2 | other | upstream | 3155280 | 5263582 ~ 5356697 (+) | False | znf827 |
| TU52056 | other | downstream | 2035029 | 10552259 ~ 10558295 (+) | True | sprn |
| XR_004577889.1 | other | downstream | 2077344 | 10594574 ~ 10608704 (+) | False | LOC113543929 |
| XR_004577793.1 | other | downstream | 2582363 | 11099593 ~ 11171114 (+) | False | dntt |
| trnag-ccc | other | downstream | 3074105 | 11591335 ~ 11591405 (+) | True | trnag-ccc |
| XR_003404598.2 | other | downstream | 3165634 | 11682864 ~ 11726772 (+) | False | LOC113545306 |
